RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 LRRC4BQ9NT99 713 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 FADS3Q9Y5Q0 445 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 TRPM6Q9BX84 2022 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 DISP2A7MBM2 1401 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 NPHP3-ACAD11A0A0J9YXS1 232 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 SCRN3Q0VDG4 424 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PROSER3Q2NL68 480 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 EMC10Q5UCC4 262 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PDCD10Q9BUL8 212 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 SPATA5L1Q9BVQ7 753 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 ZCCHC2Q9C0B9 1178 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 CAPN6Q9Y6Q1 641 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 BAZ2AQ9UIF9 1905 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 SPDYE5A6NIY4 337 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PPEF1O14829 653 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 GJB6O95452 261 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 IFNA7P01567 189 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PDHBP11177 359 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 FDPSP14324 419 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 SLC1A6P48664 564 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 SPDYE7PQ495Y7 208 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 TMEM110Q86TL2 294 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PQLC1Q8N2U9 271 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 LRRC17Q8N6Y2 441 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PPP1R10Q96QC0 940 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 SPRTNQ9H040 489 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 EBF2Q9HAK2 575 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 GALNT8Q9NY28 637 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 GNPTGQ9UJJ9 305 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 NDUFB9Q9Y6M9 179 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 C5orf60A6NFR6 353 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 SASH3O75995 380 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 TGFB3P10600 412 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 FCER1AP12319 257 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 QRICH1Q2TAL8 776 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 PLET1Q6UQ28 207 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 C12orf56Q8IXR9 622 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 FBXO36Q8NEA4 188 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ARHGAP28Q9P2N2 729 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 SLC39A10Q9ULF5 831 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 MYL3P08590 195 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ATP6V0D1P61421 351 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ERVK-9P63128 1117 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 SF3A3Q12874 501 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 BBS12Q6ZW61 710 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 CLNKQ7Z7G1 428 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 NT5DC3Q86UY8 548 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 WDR49Q8IV35 697 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 SLC30A8Q8IWU4 369 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 IRGQQ8WZA9 623 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ATRNO75882 1429 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 NDUFAF6Q330K2 333 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 BTBD8Q5XKL5 378 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 UNC5BQ8IZJ1 945 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 USP18Q9UMW8 372 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 POLIQ9UNA4 740 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF185O15231 689 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 CYP1A2P05177 515 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 TCF4P15884 667 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 PRR5LQ6MZQ0 368 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ELMOD1Q8N336 334 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 OXER1Q8TDS5 423 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 DQX1Q8TE96 717 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 AIFM3Q96NN9 605 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 SLITRK2Q9H156 845 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 DENND2DQ9H6A0 471 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 PCDH18Q9HCL0 1135 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 KCNQ5Q9NR82 932 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 C1orf232A0A0U1RR37 186 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 EPHB2P29323 1055 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 CCT3P49368 545 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 NCALDP61601 193 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF211Q13398 564 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 LIN52Q52LA3 116 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 HABP4Q5JVS0 413 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ADGRF4Q8IZF3 695 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 RASGEF1CQ8N431 466 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 HES6Q96HZ4 224 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 REEP1Q9H902 201 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 EMC3Q9P0I2 261 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 USF3Q68DE3 2245 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ORC5O43913 435 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 HPCAL1P37235 193 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 TBCELQ5QJ74 424 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 TMEM26Q6ZUK4 368 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ATG9AQ7Z3C6 839 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 PROSER1Q86XN7 944 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 TBC1D16Q8TBP0 767 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ZHX1-C8orf76Q96EF9 292 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 FAM213AQ9BRX8 229 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 TMEM45AQ9NWC5 275 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 GMIPQ9P107 970 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 MYMKA6NI61 221 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 PMM2O15305 246 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 GUCA1CO95843 209 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 PENKP01210 267 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 CSE1LP55060 971 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 FASTKQ14296 549 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ZC2HC1CQ53FD0 456 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 KIAA1841Q6NSI8 718 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms