RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MRPL42Q9Y6G3 142 aaKnown RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 GPR25O00155 361 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 CILPO75339 1184 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 GOT1P17174 413 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 PTPN1P18031 435 aaKnown RBP10.4□□□□□ -0.75
PTPRA-203ENST00000356147 SDC4P31431 198 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 DPP6P42658 865 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 HDAC4P56524 1084 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 GOLGA7BQ2TAP0 167 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 NBPF12Q5TAG4 269 aaPredicted RBP10.4□□□□□ -0.75
PTPRA-203ENST00000356147 ATF7IP2Q5U623 682 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 TRIM74Q86UV6 250 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 TRIM73Q86UV7 250 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 ZBTB46Q86UZ6 589 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 DCLK2Q8N568 766 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 PICK1Q9NRD5 415 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 TDRKHQ9Y2W6 561 aaKnown RBP10.4□□□□□ -0.75
PTPRA-203ENST00000356147 RPS6KL1Q9Y6S9 549 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 DNAH12Q6ZR08 3092 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 ARID2Q68CP9 1835 aa10.4□□□□□ -0.75
PTPRA-203ENST00000356147 KCNK1O00180 336 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 RPL5P46777 297 aaKnown RBP10.39□□□□□ -0.75
PTPRA-203ENST00000356147 SERPINB9P50453 376 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 ITGA7Q13683 1181 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 OGFRL1Q5TC84 451 aaPredicted RBP10.39□□□□□ -0.75
PTPRA-203ENST00000356147 MAP3K21Q5TCX8 1036 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 ZPBP2Q6X784 338 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 B3GNT6Q6ZMB0 384 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 DSELQ8IZU8 1212 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 CCDC185Q8N715 623 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 TDRD5Q8NAT2 981 aaKnown RBP10.39□□□□□ -0.75
PTPRA-203ENST00000356147 COLGALT1Q8NBJ5 622 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 JADE3Q92613 823 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 NPAS2Q99743 824 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 R3HDMLQ9H3Y0 253 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 RPF1Q9H9Y2 349 aaKnown RBP10.39□□□□□ -0.75
PTPRA-203ENST00000356147 SNX15Q9NRS6 342 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 PGAP2Q9UHJ9 254 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 PSMD13Q9UNM6 376 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 SMIM31A0A1B0GVY4 71 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 BCLAF3A2AJT9 711 aaKnown RBP10.39□□□□□ -0.75
PTPRA-203ENST00000356147 MAFGO15525 162 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 PIK3R1P27986 724 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 PSMB4P28070 264 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 AVPR1AP37288 418 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 MAGEA3P43357 314 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 CEACAM7Q14002 265 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 PPP1R26Q5T8A7 1209 aaPredicted RBP10.39□□□□□ -0.75
PTPRA-203ENST00000356147 IL31Q6EBC2 164 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 LCA5Q86VQ0 697 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 FAM131BQ86XD5 332 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 DTNBP1Q96EV8 351 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 HSPBAP1Q96EW2 488 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 FCRL3Q96P31 734 aaPredicted RBP10.39□□□□□ -0.75
PTPRA-203ENST00000356147 CDT1Q9H211 546 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 TMEM134Q9H6X4 195 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 TCF7L2Q9NQB0 619 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 MTMR10Q9NXD2 777 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 DTLQ9NZJ0 730 aa10.39□□□□□ -0.75
PTPRA-203ENST00000356147 TMEM233B4DJY2 109 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 TK2O00142 265 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 GABBR2O75899 941 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 PFKMP08237 780 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 CDK4P11802 303 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 SLC5A2P31639 672 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 RGS2P41220 211 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 ZBTB8OSQ8IWT0 167 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 PCDH20Q8N6Y1 951 aaKnown RBP10.38□□□□□ -0.75
PTPRA-203ENST00000356147 ARNTL2Q8WYA1 636 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 HPDLQ96IR7 371 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 KLHL32Q96NJ5 620 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 KCNK16Q96T55 309 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 PCDHAC1Q9H158 963 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 MKS1Q9NXB0 559 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 CEP350Q5VT06 3117 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 ATP9BO43861 1147 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 P4HA1P13674 534 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 LCP1P13796 627 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 HDCP19113 662 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 AP3M2P53677 418 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 CDH15P55291 814 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 HPCAP84074 193 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 STXBP2Q15833 593 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 HSDL1Q3SXM5 330 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 HSP90AA5PQ58FG0 334 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 SLC9A4Q6AI14 798 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 SAMD7Q7Z3H4 446 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 NCAPG2Q86XI2 1143 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 CPNE9Q8IYJ1 553 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 OR52K1Q8NGK4 314 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 CDKL2Q92772 493 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 ZNF669Q96BR6 464 aaPredicted RBP10.38□□□□□ -0.75
PTPRA-203ENST00000356147 GATA5Q9BWX5 397 aaPredicted RBP10.38□□□□□ -0.75
PTPRA-203ENST00000356147 SENP6Q9GZR1 1112 aaPredicted RBP10.38□□□□□ -0.75
PTPRA-203ENST00000356147 CDH19Q9H159 772 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 TMEM165Q9HC07 324 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 ANLNQ9NQW6 1124 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 DNAJC28Q9NX36 388 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 SORCS3Q9UPU3 1222 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 A0A0J9YVX5 310 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms