RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 BFSP2Q13515 415 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 GPR20Q99678 358 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 ECSITQ9BQ95 431 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 SNRNP25Q9BV90 132 aaKnown RBP14.4□□□□□ -0.1
SREBF1-202ENST00000355815 UTP6Q9NYH9 597 aaKnown RBP14.4□□□□□ -0.1
SREBF1-202ENST00000355815 TEKT2Q9UIF3 430 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 CAPN8A6NHC0 703 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 RIPK1Q13546 671 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 UBAP2LQ14157 1087 aaKnown RBP14.4□□□□□ -0.1
SREBF1-202ENST00000355815 ZNF268Q14587 947 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-202ENST00000355815 LACTB2Q53H82 288 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-202ENST00000355815 NOTUMQ6P988 496 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 PARP8Q8N3A8 854 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 COLGALT1Q8NBJ5 622 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 CAPSLQ8WWF8 208 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 TMEM134Q9H6X4 195 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-202ENST00000355815 KIF17Q9P2E2 1029 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 CDYLQ9Y232 598 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 APOC4-APOC2K7ER74 178 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 JCHAINP01591 159 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 APOC2P02655 101 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 CYP1A1P04798 512 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 LYNP07948 512 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 CDKN2BP42772 138 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 DMC1Q14565 340 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 SLC26A11Q86WA9 606 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 TFB1MQ8WVM0 346 aaKnown RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 COQ7Q99807 217 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 MRPL45Q9BRJ2 306 aaKnown RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 PIDD1Q9HB75 910 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 ADARB2Q9NS39 739 aaKnown RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 HNRNPCL2B2RXH8 293 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 PTGES3LE9PB15 166 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 PDHXO00330 501 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 CYB561D2O14569 222 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 TSC22D2O75157 780 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 WDR47O94967 919 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 MGAT1P26572 445 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 CSE1LP55060 971 aaKnown RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 GBE1Q04446 702 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 LIN52Q52LA3 116 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 FBXO47Q5MNV8 452 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 RFWD3Q6PCD5 774 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 SNX32Q86XE0 403 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 SH3TC2Q8TF17 1288 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 PABPC5Q96DU9 382 aaKnown RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 PLEKHA5Q9HAU0 1116 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 NKX1-2Q9UD57 310 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 MAFBQ9Y5Q3 323 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 RTN3O95197 1032 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 RALBP11234 206 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 MAGP20916 626 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 CHN2P52757 468 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 NUP107P57740 925 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 RNF43Q68DV7 783 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 VSTM1Q6UX27 236 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 TTC7BQ86TV6 843 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 ZCCHC7Q8N3Z6 543 aaKnown RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 ZC3H15Q8WU90 426 aaKnown RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 OMA1Q96E52 524 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 SEPHS2Q99611 448 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 ILKAPQ9H0C8 392 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-202ENST00000355815 EFCAB1Q9HAE3 211 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 HPS4Q9NQG7 708 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 ARHGEF38Q9NXL2 777 aa14.39□□□□□ -0.11
SREBF1-202ENST00000355815 SRP72O76094 671 aaKnown RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 BCL10O95999 233 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 S100A5P33763 92 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 POU5F1Q01860 360 aaKnown RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 TAF1CQ15572 869 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 PCDH20Q8N6Y1 951 aaKnown RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 C2orf69Q8N8R5 385 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 CPT1BQ92523 772 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 ZNF560Q96MR9 790 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 CAMKK2Q96RR4 588 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 EPAS1Q99814 870 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 SPON2Q9BUD6 331 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 ZMYND8Q9ULU4 1186 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 PRG3Q9Y2Y8 225 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 COMMD3-BMI1R4GMX3 469 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 NFASCO94856 1347 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 TCRBV9S1A1TA0A576 114 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 WDR4P57081 412 aaKnown RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 LSM3P62310 102 aaKnown RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 SPOUT1Q5T280 376 aaKnown RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 MARK4Q96L34 752 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 ROGDIQ9GZN7 287 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 NXF3Q9H4D5 531 aaKnown RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 TXNRD2Q9NNW7 524 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 SAR1AQ9NR31 198 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 ZSCAN9O15535 394 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 TRUB2O95900 331 aaKnown RBP14.38□□□□□ -0.11
SREBF1-202ENST00000355815 ERVK-10P10266 1014 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 THRAP10827 490 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 TAF6P49848 677 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 PREBQ9HCU5 417 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 SELENONQ9NZV5 590 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 SLC24A2Q9UI40 661 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 TNPO2O14787 897 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms