RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 GAD1Q99259 594 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 SIKE1Q9BRV8 207 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 WWP1Q9H0M0 922 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 YY1AP1Q9H869 796 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 ARL8BQ9NVJ2 186 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 THAP1Q9NVV9 213 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 TXNDC16Q9P2K2 825 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 GIT1Q9Y2X7 761 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 LTFP02788 710 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 NCAM1P13591 858 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 MLH1P40692 756 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 CCNG1P51959 295 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 PPIDQ08752 370 aaKnown RBP22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 INSCQ1MX18 579 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 XPNPEP3Q9NQH7 507 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 FBXO6Q9NRD1 293 aaPredicted RBP22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 TSC2P49815 1807 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 MYBPHLA2RUH7 354 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 F5H423 210 aaPredicted RBP22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 AKR1A1P14550 325 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 GARSP41250 739 aaKnown RBP22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 CLCNKBP51801 687 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 CRADDP78560 199 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 RNF169Q8NCN4 708 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 SMARCD1Q96GM5 515 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 ANKRD27Q96NW4 1050 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 LRRC40Q9H9A6 602 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 RNPEPL1Q9HAU8 725 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 SYBUQ9NX95 663 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 TRHDEQ9UKU6 1024 aa22.84■■□□□ 1.25
NKX2-1-201ENST00000354822 FCHO1O14526 889 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 AP2A1O95782 977 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 LMNAP02545 664 aaKnown RBP22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 ESRRAP11474 423 aaPredicted RBP22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 PTPN3P26045 913 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 FRG1Q14331 258 aaKnown RBP22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 GRTP1Q5TC63 336 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 BSPRYQ5W0U4 402 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 ARID3BQ8IVW6 561 aaPredicted RBP22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 UNC5BQ8IZJ1 945 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 IRGQQ8WZA9 623 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 VAT1Q99536 393 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 CPNE1Q99829 537 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 MTG1Q9BT17 334 aaPredicted RBP22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 CEP41Q9BYV8 373 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 DDIT4Q9NX09 232 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 ZFATQ9P243 1243 aa22.83■■□□□ 1.25
NKX2-1-201ENST00000354822 FAM72CH0Y354 149 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 GYG2O15488 501 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 DUSP11O75319 330 aaKnown RBP22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 USP17L7P0C7H9 530 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 SERPINB6P35237 376 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 PDE1BQ01064 536 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 ACCSLQ4AC99 568 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 FAM72AQ5TYM5 149 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 FAM72DQ6L9T8 149 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 FAM72BQ86X60 149 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 ZMIZ2Q8NF64 920 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 PPP1R14CQ8TAE6 165 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 RSRC1Q96IZ7 334 aaKnown RBP22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 KCNK16Q96T55 309 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 COLEC11Q9BWP8 271 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 BFARQ9NZS9 450 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 RPS6KL1Q9Y6S9 549 aa22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 MYO18AQ92614 2054 aaKnown RBP22.83■■□□□ 1.24
NKX2-1-201ENST00000354822 ALDOAP04075 364 aaKnown RBP22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 RPLP2P05387 115 aaKnown RBP22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 ITGA2BP08514 1039 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 GP5P40197 560 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 CFAP61Q8NHU2 1237 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 HDAC11Q96DB2 347 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 CERS2Q96G23 380 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 EPAS1Q99814 870 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 CADM1Q9BY67 442 aaKnown RBP22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 WDCPQ9H6R7 721 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 CSNK1G1Q9HCP0 422 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 MAGEB16A2A368 324 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 MEIS3P2A8K0S8 358 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 KCNK1O00180 336 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 TPP1O14773 563 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 GSC2O15499 205 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 IGFBP6P24592 240 aaPredicted RBP22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 PDE1CQ14123 709 aaPredicted RBP22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 FASTKD1Q53R41 847 aaKnown RBP22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 ITPRIPL1Q6GPH6 555 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 TLDC1Q6P9B6 456 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 NETO2Q8NC67 525 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 SMC1BQ8NDV3 1235 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 ADAM32Q8TC27 787 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 NSMCE1Q8WV22 266 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 ADAM28Q9UKQ2 775 aa22.82■■□□□ 1.24
NKX2-1-201ENST00000354822 ARL5CA6NH57 179 aa22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 HHLA1C9JL84 531 aa22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 C6orf222P0C671 652 aaPredicted RBP22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 CXCR3P49682 368 aa22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 TBCCQ15814 346 aa22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 RASSF3Q86WH2 238 aa22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 MIPEPQ99797 713 aa22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 MMADHCQ9H3L0 296 aaPredicted RBP22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms