RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 ACOX2Q99424 681 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 EDEM2Q9BV94 578 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 CALCOCO1Q9P1Z2 691 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 CNTN6Q9UQ52 1028 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 RAD54BQ9Y620 910 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 SAR1BQ9Y6B6 198 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 SDK1Q7Z5N4 2213 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 ANKRD62A6NC57 917 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 PENKP01210 267 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-202ENST00000354433 CHRM1P11229 460 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-202ENST00000354433 USP8P40818 1118 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 P2RY2P41231 377 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 CDR2Q01850 454 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 STARD3Q14849 445 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 PKDCCQ504Y2 493 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 PLA2G2CQ5R387 149 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 RNF43Q68DV7 783 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 CPXM2Q8N436 756 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 IPO4Q8TEX9 1081 aaKnown RBP11.97□□□□□ -0.49
CDRT1-202ENST00000354433 PIGKQ92643 395 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 FAM149B1Q96BN6 582 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 ATXN2Q99700 1313 aaKnown RBP11.97□□□□□ -0.49
CDRT1-202ENST00000354433 CARD6Q9BX69 1037 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 PACSIN1Q9BY11 444 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 CIPCQ9C0C6 399 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 ISCUQ9H1K1 167 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 RXFP3Q9NSD7 469 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 MYOFQ9NZM1 2061 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 SALL4Q9UJQ4 1053 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 HBS1LQ9Y450 684 aaKnown RBP11.97□□□□□ -0.49
CDRT1-202ENST00000354433 CAPN6Q9Y6Q1 641 aa11.97□□□□□ -0.49
CDRT1-202ENST00000354433 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 BCLAF3A2AJT9 711 aaKnown RBP11.96□□□□□ -0.49
CDRT1-202ENST00000354433 THAP12O43422 761 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 MED7O43513 233 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 TSPAN3O60637 253 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 RTN2O75298 545 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 LTFP02788 710 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 ATP1A1P05023 1023 aaKnown RBP11.96□□□□□ -0.49
CDRT1-202ENST00000354433 NCAM1P13591 858 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 CYP11B1P15538 503 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 GABRG2P18507 467 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 GNA15P30679 374 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 GALCP54803 685 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 HADHBP55084 474 aaKnown RBP11.96□□□□□ -0.49
CDRT1-202ENST00000354433 RPL6Q02878 288 aaKnown RBP11.96□□□□□ -0.49
CDRT1-202ENST00000354433 TRIP4Q15650 581 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-202ENST00000354433 GEN1Q17RS7 908 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 MPPE1Q53F39 396 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 PPM1JQ5JR12 505 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 PPP1R2P3Q6NXS1 205 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 KIAA1324Q6UXG2 1013 aaKnown RBP11.96□□□□□ -0.49
CDRT1-202ENST00000354433 TMEFF1Q8IYR6 380 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 FRMD1Q8N878 549 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 CLEC4CQ8WTT0 213 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 SLC35F5Q8WV83 523 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 CTNNBL1Q8WYA6 563 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-202ENST00000354433 HSFY1Q96LI6 401 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 HCN2Q9UL51 889 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 CYP8B1Q9UNU6 501 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 CACNA1AO00555 2505 aa11.96□□□□□ -0.49
CDRT1-202ENST00000354433 A0A1W2PQF6 199 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 CAPN9O14815 690 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 KHNYNO15037 678 aaKnown RBP11.96□□□□□ -0.5
CDRT1-202ENST00000354433 FBXO21O94952 628 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 CISD3P0C7P0 127 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 CHRNB2P17787 502 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 TCP1P17987 556 aaKnown RBP11.96□□□□□ -0.5
CDRT1-202ENST00000354433 NDUFV2P19404 249 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 ZNF132P52740 706 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 NAP1L1P55209 391 aaKnown RBP11.96□□□□□ -0.5
CDRT1-202ENST00000354433 CKAP4Q07065 602 aaKnown RBP11.96□□□□□ -0.5
CDRT1-202ENST00000354433 STPG1Q5TH74 334 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 LYSMD4Q5XG99 296 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 KIAA1211LQ6NV74 962 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 NOP9Q86U38 636 aaKnown RBP11.96□□□□□ -0.5
CDRT1-202ENST00000354433 CACUL1Q86Y37 369 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 SYCE1Q8N0S2 351 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 SCML4Q8N228 414 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 SLC20A1Q8WUM9 679 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 RFFLQ8WZ73 363 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 IRGQQ8WZA9 623 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 DDX1Q92499 740 aaKnown RBP11.96□□□□□ -0.5
CDRT1-202ENST00000354433 ANKRD7Q92527 254 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 P2RY11Q96G91 374 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 GABRG3Q99928 467 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 SNX12Q9UMY4 172 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 SLC27A6Q9Y2P4 619 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 HYOU1Q9Y4L1 999 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 STON1Q9Y6Q2 735 aa11.96□□□□□ -0.5
CDRT1-202ENST00000354433 EML5Q05BV3 1969 aa11.95□□□□□ -0.5
CDRT1-202ENST00000354433 TYW5A2RUC4 315 aaKnown RBP11.95□□□□□ -0.5
CDRT1-202ENST00000354433 PATE3B3GLJ2 98 aa11.95□□□□□ -0.5
CDRT1-202ENST00000354433 WASH3PC4AMC7 463 aa11.95□□□□□ -0.5
CDRT1-202ENST00000354433 ENC1O14682 589 aa11.95□□□□□ -0.5
CDRT1-202ENST00000354433 SART1O43290 800 aaKnown RBP11.95□□□□□ -0.5
CDRT1-202ENST00000354433 BUB1O43683 1085 aa11.95□□□□□ -0.5
CDRT1-202ENST00000354433 SYNCRIPO60506 623 aaKnown RBP11.95□□□□□ -0.5
CDRT1-202ENST00000354433 ZNF217O75362 1048 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms