RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PDE5AO76074 875 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 MX2P20592 715 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 TYK2P29597 1187 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 VWA5B1Q5TIE3 1220 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 LRRC52Q8N7C0 313 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 C7orf31Q8N865 590 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 CERS2Q96G23 380 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 PCDHB12Q9Y5F1 795 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 PDCD11Q14690 1871 aaKnown RBP25.15■■□□□ 1.62
CPNE1-202ENST00000352393 SORBS2O94875 1100 aaKnown RBP25.15■■□□□ 1.62
CPNE1-202ENST00000352393 ERVK-10P10266 1014 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 ADORA2BP29275 332 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 GMPRP36959 345 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 GARSP41250 739 aaKnown RBP25.15■■□□□ 1.62
CPNE1-202ENST00000352393 ASPHQ12797 758 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 ITGA9Q13797 1035 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 CCDC153Q494R4 210 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 FAM131BQ86XD5 332 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 SNX27Q96L92 541 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 CPNE1Q99829 537 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 PLEKHA5Q9HAU0 1116 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 SNX15Q9NRS6 342 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 IL1RAPL1Q9NZN1 696 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 ADAM28Q9UKQ2 775 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 CPA3P15088 417 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 PRDX6P30041 224 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 SMAD1Q15797 465 aaKnown RBP25.15■■□□□ 1.62
CPNE1-202ENST00000352393 Q3C1V9 767 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 DCAF4L1Q3SXM0 396 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 SPANXN3Q5MJ09 141 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 BSPRYQ5W0U4 402 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 AZIN2Q96A70 460 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 CEP41Q9BYV8 373 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 RBPJLQ9UBG7 517 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 ADAMTS6Q9UKP5 1117 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 CSADQ9Y600 493 aa25.15■■□□□ 1.62
CPNE1-202ENST00000352393 POLBP06746 335 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 CDK7P50613 346 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 XIAPP98170 497 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 ZBTB6Q15916 424 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 SFT2D3Q587I9 215 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 GJC2Q5T442 439 aaPredicted RBP25.14■■□□□ 1.62
CPNE1-202ENST00000352393 GRTP1Q5TC63 336 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 MTHFD1LQ6UB35 978 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 CMC1Q7Z7K0 106 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 PSTKQ8IV42 348 aaKnown RBP25.14■■□□□ 1.62
CPNE1-202ENST00000352393 PHTF2Q8N3S3 785 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 SLC26A7Q8TE54 656 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 PGBD4Q96DM1 585 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 SHCBP1LQ9BZQ2 653 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 ZNF358Q9NW07 568 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 IGSF9Q9P2J2 1179 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 TXNDC16Q9P2K2 825 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 POMPQ9Y244 141 aa25.14■■□□□ 1.62
CPNE1-202ENST00000352393 SRCAPQ6ZRS2 3230 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 SNUPNO95149 360 aaKnown RBP25.13■■□□□ 1.61
CPNE1-202ENST00000352393 PIM1P11309 404 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-202ENST00000352393 MLH1P40692 756 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 MSLNQ13421 630 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-202ENST00000352393 OTUD1Q5VV17 481 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-202ENST00000352393 DLK2Q6UY11 383 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 FRMD7Q6ZUT3 714 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 ZNF567Q8N184 647 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 NETO2Q8NC67 525 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 RBBP8Q99708 897 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 VCX3BQ9H321 246 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 CYP4F11Q9HBI6 524 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 MATKP42679 507 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 ACADSBP45954 432 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 CES3Q6UWW8 571 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 DEFB107AQ8IZN7 70 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 DCLK2Q8N568 766 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 RNF139Q8WU17 664 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 KBTBD7Q8WVZ9 684 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 CCDC124Q96CT7 223 aaKnown RBP25.13■■□□□ 1.61
CPNE1-202ENST00000352393 TBC1D30Q9Y2I9 924 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 RPS6KL1Q9Y6S9 549 aa25.13■■□□□ 1.61
CPNE1-202ENST00000352393 SULT1E1P49888 294 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 SERPINB8P50452 374 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 LAMC2Q13753 1193 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 PDK1Q15118 436 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 EPGNQ6UW88 154 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 CRYBG2Q8N1P7 616 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 C18orf25Q96B23 403 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-202ENST00000352393 FCRL3Q96P31 734 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-202ENST00000352393 OXCT2Q9BYC2 517 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-202ENST00000352393 TRIM4Q9C037 500 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 KLHL4Q9C0H6 718 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 CDH19Q9H159 772 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 SNTG2Q9NY99 539 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 CDY2AQ9Y6F7 541 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 CDY1Q9Y6F8 540 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 ZBTB14O43829 449 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 ZNF286BP0CG31 522 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 NCF2P19878 526 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-202ENST00000352393 LIMK2P53671 638 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 CUL3Q13618 768 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 RBBP5Q15291 538 aaKnown RBP25.12■■□□□ 1.61
CPNE1-202ENST00000352393 SLC25A52Q3SY17 297 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 LPCAT4Q643R3 524 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms