RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GCATO75600 419 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 AMHP03971 560 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 ALOX5P09917 674 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 CXCR2P25025 360 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 AP3M2P53677 418 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 TRPC3Q13507 836 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 ATAD3BQ5T9A4 648 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 MON1BQ7L1V2 547 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 SLC38A6Q8IZM9 456 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 GOLM1Q8NBJ4 401 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 AGR3Q8TD06 166 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 SH3YL1Q96HL8 342 aaPredicted RBP13.56□□□□□ -0.24
IFT88-202ENST00000351808 IMPG2Q9BZV3 1241 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 WDR41Q9HAD4 459 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 CYP3A7-CYP3A51PA0A087WV96 503 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 ILVBLA1L0T0 632 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 ZNF839A8K0R7 811 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 FAM155AB1AL88 458 aaPredicted RBP13.56□□□□□ -0.24
IFT88-202ENST00000351808 SOCS2O14508 198 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 CSH1P0DML2 217 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 CSH2P0DML3 217 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 PRKACBP22694 351 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 TGM1P22735 817 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 CYP3A7P24462 503 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 NT5C2P49902 561 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 TFDP3Q5H9I0 405 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 LIN9Q5TKA1 542 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 HEATR4Q86WZ0 1026 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 ANKRD13BQ86YJ7 626 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 FAM71DQ8N9W8 422 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 ABHD11Q8NFV4 315 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 PPP1R36Q96LQ0 422 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 NT5C1BQ96P26 610 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 OR52B2Q96RD2 323 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 PCDHAC1Q9H158 963 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 TRIT1Q9H3H1 467 aaKnown RBP13.56□□□□□ -0.24
IFT88-202ENST00000351808 SCUBE2Q9NQ36 999 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 SMOXQ9NWM0 555 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 MKS1Q9NXB0 559 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 GDAP2Q9NXN4 497 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 QPCTLQ9NXS2 382 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 SNED1Q8TER0 1413 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 RGSL1A5PLK6 1076 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 TIMM44O43615 452 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 MX2P20592 715 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 ECE1P42892 770 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 RAD23AP54725 363 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 CSE1LP55060 971 aaKnown RBP13.55□□□□□ -0.24
IFT88-202ENST00000351808 N4BP2L1Q5TBK1 243 aaPredicted RBP13.55□□□□□ -0.24
IFT88-202ENST00000351808 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 MAMDC4Q6UXC1 1216 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 CCDC81Q6ZN84 652 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 C10orf107Q8IVU9 208 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 MAPK15Q8TD08 544 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 PPWD1Q96BP3 646 aaKnown RBP13.55□□□□□ -0.24
IFT88-202ENST00000351808 TMA16Q96EY4 203 aaKnown RBP13.55□□□□□ -0.24
IFT88-202ENST00000351808 PI4K2AQ9BTU6 479 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 RNPEPQ9H4A4 650 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 NOL6Q9H6R4 1146 aaKnown RBP13.55□□□□□ -0.24
IFT88-202ENST00000351808 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 PCDHGA8Q9Y5G5 932 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 SLIT2O94813 1529 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 ADAMTSL3P82987 1691 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 F8VP50 259 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 RGS13O14921 159 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 SERPINE1P05121 402 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 EEF1DP29692 281 aaKnown RBP13.55□□□□□ -0.24
IFT88-202ENST00000351808 ARL1P40616 181 aaPredicted RBP13.55□□□□□ -0.24
IFT88-202ENST00000351808 CDKN2BP42772 138 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 TNK2Q07912 1038 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 ZNF846Q147U1 533 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 CHSY3Q70JA7 882 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 FBXO33Q7Z6M2 555 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 GALNT13Q8IUC8 556 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 HERC6Q8IVU3 1022 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 TNIP2Q8NFZ5 429 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 TAS1R2Q8TE23 839 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 ZC3H15Q8WU90 426 aaKnown RBP13.55□□□□□ -0.24
IFT88-202ENST00000351808 C17orf80Q9BSJ5 609 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 EMCNQ9ULC0 261 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 DGKBQ9Y6T7 804 aa13.55□□□□□ -0.24
IFT88-202ENST00000351808 FAM86B1E9PN63 330 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 TNPO2O14787 897 aaKnown RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 ABCB1P08183 1280 aaPredicted RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 FAM86B2P0C5J1 330 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 YAP1P46937 504 aaKnown RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 GABRB2P47870 512 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 BFSP2Q13515 415 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 MAPRE1Q15691 268 aaKnown RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 ASPRV1Q53RT3 343 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 HMBOX1Q6NT76 420 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 PIWIL3Q7Z3Z3 882 aaKnown RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 CYP2W1Q8TAV3 490 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 PGBD4Q96DM1 585 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 MED30Q96HR3 178 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 P2RX7Q99572 595 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms