RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 AGAP9Q5VTM2 703 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 C4orf33Q8N1A6 199 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 CCNYL1Q8N7R7 359 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 GANCQ8TET4 914 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 ALG3Q92685 438 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 FIZ1Q96SL8 496 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 MANSC1Q9H8J5 431 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 ANGPTL2Q9UKU9 493 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 HEATR9A2RTY3 570 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 MAP3K7O43318 606 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 AVPR1AP37288 418 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 CCL14Q16627 93 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 PDPK2PQ6A1A2 396 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 RFX8Q6ZV50 586 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 SLC25A41Q8N5S1 370 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 EPS8L3Q8TE67 593 aaKnown RBP12.46□□□□□ -0.41
SMAD9-201ENST00000350148 E2F7Q96AV8 911 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 MCRS1Q96EZ8 462 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 SEPT3Q9UH03 358 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 ARL5CA6NH57 179 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 ARVCFO00192 962 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 MEFVO15553 781 aaPredicted RBP12.46□□□□□ -0.42
SMAD9-201ENST00000350148 KLHL2O95198 593 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 PTPN7P35236 360 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 NEK2P51955 445 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 SETD3Q86TU7 594 aaPredicted RBP12.46□□□□□ -0.42
SMAD9-201ENST00000350148 ZBTB10Q96DT7 871 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 DEFB118Q96PH6 123 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 PCDH18Q9HCL0 1135 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 FAM153AQ9UHL3 310 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 MYH4Q9Y623 1939 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 MAPK8P45983 427 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 PPP3CCP48454 512 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 PSMD5Q16401 504 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 TTLL9Q3SXZ7 439 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 NECAB2Q7Z6G3 386 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 ARL8AQ96BM9 186 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 CPNE1Q99829 537 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 FICDQ9BVA6 458 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 TASP1Q9H6P5 420 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 COG5Q9UP83 839 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 ANKRD6Q9Y2G4 727 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 RWDD3Q9Y3V2 267 aa12.46□□□□□ -0.42
SMAD9-201ENST00000350148 ARHGEF9O43307 516 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 ATP5BP06576 529 aaKnown RBP12.45□□□□□ -0.42
SMAD9-201ENST00000350148 RBL1P28749 1068 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 GP5P40197 560 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 ZNF844Q08AG5 666 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 NOMO1Q15155 1222 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 FAXCQ5TGI0 409 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 RAB42Q8N4Z0 105 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 FIBCD1Q8N539 461 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 CENPTQ96BT3 561 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 ETAA1Q9NY74 926 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
SMAD9-201ENST00000350148 ZSCAN5CA6NGD5 496 aaPredicted RBP12.45□□□□□ -0.42
SMAD9-201ENST00000350148 SLC9A3R1O14745 358 aaPredicted RBP12.45□□□□□ -0.42
SMAD9-201ENST00000350148 CSPG5O95196 566 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 MORN1Q5T089 497 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 FLCNQ8NFG4 579 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 ULK4Q96C45 1275 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 TMEM175Q9BSA9 504 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 ZYG11BQ9C0D3 744 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 GYG2O15488 501 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 SYF2O95926 243 aaKnown RBP12.45□□□□□ -0.42
SMAD9-201ENST00000350148 GRK2P25098 689 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 KLRC2P26717 231 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 ELK3P41970 407 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 INCA1Q0VD86 236 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 TWF1Q12792 350 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 PPM1LQ5SGD2 360 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 CCDC80Q76M96 950 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 SAPCD2Q86UD0 394 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 FAM228AQ86W67 206 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 JOSD2Q8TAC2 188 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 SLC40A1Q9NP59 571 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 NDFIP2Q9NV92 336 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 KRT4P19013 534 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 RFC2P35250 354 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 ANKRD20A2Q5SQ80 823 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 ANKRD20A1Q5TYW2 823 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 PRUNE1Q86TP1 453 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 C12orf29Q8N999 325 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 SPATA17Q96L03 361 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 IL22Q9GZX6 179 aa12.45□□□□□ -0.42
SMAD9-201ENST00000350148 MRPL46Q9H2W6 279 aaKnown RBP12.45□□□□□ -0.42
SMAD9-201ENST00000350148 MARCKSL1P49006 195 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 NSUN2Q08J23 767 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 CYP1B1Q16678 543 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 C17orf99Q6UX52 265 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 ECHDC2Q86YB7 292 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 SUGP1Q8IWZ8 645 aaKnown RBP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 SEC16BQ96JE7 1060 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 TBL1YQ9BQ87 522 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 SYTL2Q9HCH5 934 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 MLXIPLQ9NP71 852 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 ADH1AP07327 375 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 RBP1P09455 135 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 OR1E1P30953 314 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 KCTD13Q8WZ19 329 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms