RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CYTH2Q99418 400 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 GORASP1Q9BQQ3 440 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 HIPK3Q9H422 1215 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 FBXO44Q9H4M3 255 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 PPANQ9NQ55 473 aaKnown RBP7.12□□□□□ -1.27
TRIM55-203ENST00000350034 ABI2Q9NYB9 513 aaPredicted RBP7.12□□□□□ -1.27
TRIM55-203ENST00000350034 CLIC5Q9NZA1 410 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 PSMC3IPQ9P2W1 217 aaPredicted RBP7.12□□□□□ -1.27
TRIM55-203ENST00000350034 HCSTQ9UBK5 93 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 OR12D3Q9UGF7 316 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 TBX21Q9UL17 535 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 LRFN2Q9ULH4 789 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 CHMP2BQ9UQN3 213 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 TTLL3Q9Y4R7 772 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 SNX10Q9Y5X0 201 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 NR2E3Q9Y5X4 410 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 PATJQ8NI35 1801 aa7.12□□□□□ -1.27
TRIM55-203ENST00000350034 PTPRDP23468 1912 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 LAMA3Q16787 3333 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 ATXN2Q99700 1313 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TBKBP1A7MCY6 615 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 RASA4BC9J798 803 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 POC1B-GALNT4F8VUJ3 575 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 FGF10O15520 208 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 RASA4O43374 803 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TYROBPO43914 113 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 PQBP1O60828 265 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 PAGE1O75459 146 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SUN1O94901 812 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 IGLV3-27P01718 113 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 ZDHHC11BP0C7U3 371 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 EPHB2P29323 1055 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 CCR1P32246 355 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 STX2P32856 288 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 CD68P34810 354 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SERPINB6P35237 376 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 GARSP41250 739 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 GRIA1P42261 906 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 CCT5P48643 541 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 MLLT6P55198 1093 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 WDR4P57081 412 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 USP46P62068 366 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TLE2Q04725 743 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 AP1B1Q10567 949 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 RTP2Q5QGT7 225 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SDHAF4Q5VUM1 108 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 KCTD11Q693B1 232 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SLC8B1Q6J4K2 584 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 LRRC8BQ6P9F7 803 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 C6orf89Q6UWU4 347 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 UNC5AQ6ZN44 842 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 CAPN12Q6ZSI9 719 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 DENND5BQ6ZUT9 1274 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SH2D5Q6ZV89 423 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 ANKS3Q6ZW76 656 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 PRPF39Q86UA1 669 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TMEM173Q86WV6 379 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SPATS2Q86XZ4 545 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 ARHGAP12Q8IWW6 846 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SRRM1Q8IYB3 904 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 LRRC43Q8N309 656 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 ZNF276Q8N554 614 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 LZTR1Q8N653 840 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 NETO2Q8NC67 525 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SPPL2BQ8TCT7 592 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 ARNTL2Q8WYA1 636 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SGSM3Q96HU1 749 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SCLYQ96I15 445 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 FCRL2Q96LA5 508 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 CEP295NLQ96MC4 621 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SERPINB11Q96P15 392 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 PAFAH2Q99487 392 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 VAT1Q99536 393 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 EBNA1BP2Q99848 306 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 FERMT1Q9BQL6 677 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TTLL2Q9BWV7 592 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 RNF208Q9H0X6 261 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 CRISPLD1Q9H336 500 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TRABDQ9H4I3 376 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 CWH43Q9H720 699 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 MOCS1Q9NZB8 636 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 GMIPQ9P107 970 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 FNIP2Q9P278 1114 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 MTRRQ9UBK8 725 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 ZC3H7BQ9UGR2 993 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TBK1Q9UHD2 729 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SFMBT1Q9UHJ3 866 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 ZNF180Q9UJW8 692 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TRHDEQ9UKU6 1024 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 SMG5Q9UPR3 1016 aaKnown RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TLR6Q9Y2C9 796 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 ARIH1Q9Y4X5 557 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-203ENST00000350034 BACE2Q9Y5Z0 518 aa7.11□□□□□ -1.27
TRIM55-203ENST00000350034 TTC3P53804 2025 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 TMEM265A0A087WTH1 108 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 A0A1W2PPM1 405 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 FAM47DPA6NHR8 397 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 SDR42E2A6NKP2 422 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 FAM159BA6NKW6 160 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 ERI2A8K979 691 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms