RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MTERF4Q7Z6M4 381 aaKnown RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 NLRP14Q86W24 1093 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 LZTR1Q8N653 840 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 ZSCAN18Q8TBC5 510 aaPredicted RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 MICAL1Q8TDZ2 1067 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 SLC22A17Q8WUG5 538 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 LRRN4Q8WUT4 740 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 TFB1MQ8WVM0 346 aaKnown RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 TBC1D31Q96DN5 1066 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 LGMNQ99538 433 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 BRD8Q9H0E9 1235 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 GKN1Q9NS71 199 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 TPX2Q9ULW0 747 aaKnown RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 FARP1Q9Y4F1 1045 aaPredicted RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.3□□□□□ -0.6
ECM1-201ENST00000346569 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.3□□□□□ -0.6
ECM1-201ENST00000346569 FGF10O15520 208 aaPredicted RBP11.3□□□□□ -0.6
ECM1-201ENST00000346569 KCNN4O15554 427 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 ACSL4O60488 711 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 CLASP2O75122 1294 aaKnown RBP11.3□□□□□ -0.6
ECM1-201ENST00000346569 STC2O76061 302 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 OLFM2O95897 454 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 LRG1P02750 347 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 KLKB1P03952 638 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 HMBSP08397 361 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 VAV1P15498 845 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 PBX2P40425 430 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 GALNT2Q10471 571 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 CBLBQ13191 982 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 GPM6BQ13491 265 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 AFMIDQ63HM1 303 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 NADSYN1Q6IA69 706 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 FBXL22Q6P050 247 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 C4orf22Q6V702 233 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 TMC3Q7Z5M5 1100 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 CDKL3Q8IVW4 592 aaPredicted RBP11.3□□□□□ -0.6
ECM1-201ENST00000346569 ARHGAP12Q8IWW6 846 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 NPWQ8N729 165 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 NAT8LQ8N9F0 302 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 NETO2Q8NC67 525 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 PLD4Q96BZ4 506 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 ZFRQ96KR1 1074 aaKnown RBP11.3□□□□□ -0.6
ECM1-201ENST00000346569 TSGA13Q96PP4 275 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 CYP2S1Q96SQ9 504 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 FOXP3Q9BZS1 431 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 CATSPERBQ9H7T0 1116 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 NDFIP2Q9NV92 336 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 PAK5Q9P286 719 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 ZNF212Q9UDV6 495 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 HPCAL4Q9UM19 191 aa11.3□□□□□ -0.6
ECM1-201ENST00000346569 GOLGA6L7A0A1B0GV03 622 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 NDC80O14777 642 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 GREM1O60565 184 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 LPXNO60711 386 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 RHOQP17081 205 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 MX2P20592 715 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 GABRR2P28476 465 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 HOXA9P31269 272 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 SERPINB6P35237 376 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 TNNT3P45378 269 aaPredicted RBP11.29□□□□□ -0.6
ECM1-201ENST00000346569 EPHA5P54756 1037 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 ZNF33AQ06730 810 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 DHX9Q08211 1270 aaKnown RBP11.29□□□□□ -0.6
ECM1-201ENST00000346569 PPIDQ08752 370 aaKnown RBP11.29□□□□□ -0.6
ECM1-201ENST00000346569 WASHC5Q12768 1159 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 MORF4L2Q15014 288 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 UAP1Q16222 522 aaPredicted RBP11.29□□□□□ -0.6
ECM1-201ENST00000346569 FAM133BQ5BKY9 247 aaKnown RBP11.29□□□□□ -0.6
ECM1-201ENST00000346569 SPDYCQ5MJ68 293 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 TXNDC8Q6A555 127 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 RWDD4Q6NW29 188 aaKnown RBP11.29□□□□□ -0.6
ECM1-201ENST00000346569 LRRC31Q6UY01 552 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 PCGF5Q86SE9 256 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 UMODL1-AS1Q8N2C9 162 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 CCDC33Q8N5R6 958 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 HTR3CQ8WXA8 447 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 CPT1BQ92523 772 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 IGSF8Q969P0 613 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 WBP2Q969T9 261 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 HDAC11Q96DB2 347 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 MYEOVQ96EZ4 313 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 P2RY11Q96G91 374 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 SLC22A12Q96S37 553 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 PBX4Q9BYU1 374 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 TSPYL1Q9H0U9 437 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 RETREG1Q9H6L5 497 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 NOL6Q9H6R4 1146 aaKnown RBP11.29□□□□□ -0.6
ECM1-201ENST00000346569 TMEM248Q9NWD8 314 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 MPP6Q9NZW5 540 aa11.29□□□□□ -0.6
ECM1-201ENST00000346569 MTRF1LQ9UGC7 380 aaKnown RBP11.29□□□□□ -0.6
ECM1-201ENST00000346569 ANAPC1Q9H1A4 1944 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 MTCL1Q9Y4B5 1905 aaKnown RBP11.28□□□□□ -0.6
ECM1-201ENST00000346569 AGPSO00116 658 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 SMAPO00193 183 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 NRG2O14511 850 aaPredicted RBP11.28□□□□□ -0.6
ECM1-201ENST00000346569 PPP1R12AO14974 1030 aaPredicted RBP11.28□□□□□ -0.6
ECM1-201ENST00000346569 ZNF189O75820 626 aaPredicted RBP11.28□□□□□ -0.6
ECM1-201ENST00000346569 CNTN5O94779 1100 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 PAPLNO95428 1278 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms