RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 MBLAC2Q68D91 279 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 TAC4Q86UU9 113 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 PROSER1Q86XN7 944 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 MFN1Q8IWA4 741 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 CFAP52Q8N1V2 620 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 GALNT15Q8N3T1 639 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 HJURPQ8NCD3 748 aaPredicted RBP12.87□□□□□ -0.35
SGCA-202ENST00000344627 STK32AQ8WU08 396 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 FCRL2Q96LA5 508 aaPredicted RBP12.87□□□□□ -0.35
SGCA-202ENST00000344627 SLC4A5Q9BY07 1137 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 BTBD1Q9H0C5 482 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 NUCKS1Q9H1E3 243 aaKnown RBP12.87□□□□□ -0.35
SGCA-202ENST00000344627 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 LHX5Q9H2C1 402 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 PDCL3Q9H2J4 239 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 TMEM245Q9H330 911 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 THAP9Q9H5L6 903 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 SYNCQ9H7C4 482 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 POPDC2Q9HBU9 364 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 TM7SF3Q9NS93 570 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 COX16Q9P0S2 106 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 DKK4Q9UBT3 224 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 SLC12A6Q9UHW9 1150 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 DACH1Q9UI36 760 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 CYTH4Q9UIA0 394 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 KLK13Q9UKR3 277 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 PCOLCE2Q9UKZ9 415 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 NCKAP1Q9Y2A7 1128 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 CEP83Q9Y592 693 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 CKAP5Q14008 2032 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 NUMA1Q14980 2115 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 BECN2A8MW95 431 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 KCNJ18B7U540 433 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 PAPSS1O43252 624 aaPredicted RBP12.86□□□□□ -0.35
SGCA-202ENST00000344627 CBFA2T3O75081 653 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 DNTTP04053 509 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 ASLP04424 464 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 DLDP09622 509 aaKnown RBP12.86□□□□□ -0.35
SGCA-202ENST00000344627 FTH1P19P0C7X4 201 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 CD70P32970 193 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 GRIA4P48058 902 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 ST8SIA6P61647 398 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 RPS24P62847 133 aaKnown RBP12.86□□□□□ -0.35
SGCA-202ENST00000344627 YWHAZP63104 245 aaKnown RBP12.86□□□□□ -0.35
SGCA-202ENST00000344627 MTA1Q13330 715 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 PDCLQ13371 301 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 NNTQ13423 1086 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 CDH18Q13634 790 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 MAN2A1Q16706 1144 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 DCAF6Q58WW2 860 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 ZC3H12AQ5D1E8 599 aaKnown RBP12.86□□□□□ -0.35
SGCA-202ENST00000344627 NADSYN1Q6IA69 706 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 OR6B2Q6IFH4 312 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 CCNI2Q6ZMN8 369 aaPredicted RBP12.86□□□□□ -0.35
SGCA-202ENST00000344627 USP30Q70CQ3 517 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 BEND5Q7L4P6 421 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 TMEM110Q86TL2 294 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 CHSY1Q86X52 802 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 IRF2BP1Q8IU81 584 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 LGI2Q8N0V4 545 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 CHCHD4Q8N4Q1 142 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 WFDC5Q8TCV5 224 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 GANCQ8TET4 914 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 PPP1R13BQ96KQ4 1090 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 NOX5Q96PH1 765 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 GAREM1Q9H706 876 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 FAM204AQ9H8W3 233 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 DNAJC12Q9UKB3 198 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 PCDH15Q96QU1 1955 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 PCNX2A6NKB5 2137 aa12.86□□□□□ -0.35
SGCA-202ENST00000344627 GTPBP10A4D1E9 387 aaKnown RBP12.85□□□□□ -0.35
SGCA-202ENST00000344627 RNASEH1O60930 286 aaKnown RBP12.85□□□□□ -0.35
SGCA-202ENST00000344627 GRAP2O75791 330 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 TRUB2O95900 331 aaKnown RBP12.85□□□□□ -0.35
SGCA-202ENST00000344627 TOP3BO95985 862 aaKnown RBP12.85□□□□□ -0.35
SGCA-202ENST00000344627 GRK6P43250 576 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 RPL34P49207 117 aaKnown RBP12.85□□□□□ -0.35
SGCA-202ENST00000344627 CDK17Q00537 523 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 RAPGEF1Q13905 1077 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 ARID5BQ14865 1188 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 TAF5Q15542 800 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 MEA1Q16626 185 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 VWA3BQ502W6 1294 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 RAP1GAP2Q684P5 730 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 ADIPOR2Q86V24 386 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 ZCCHC9Q8N567 271 aaKnown RBP12.85□□□□□ -0.35
SGCA-202ENST00000344627 ATP6V0D2Q8N8Y2 350 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 C1orf216Q8TAB5 229 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 FIBINQ8TAL6 211 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 SHC3Q92529 594 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 SNX19Q92543 992 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 IGSF8Q969P0 613 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 MYEOVQ96EZ4 313 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 NDST4Q9H3R1 872 aa12.85□□□□□ -0.35
SGCA-202ENST00000344627 CCDC86Q9H6F5 360 aaKnown RBP12.85□□□□□ -0.35
SGCA-202ENST00000344627 F5H5T6 163 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms