RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SLC30A4O14863 429 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 RAD1O60671 282 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ATP9AO75110 1047 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ATE1O95260 518 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ENO1P06733 434 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ABHD2P08910 425 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 SLC5A1P13866 664 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ALOX12P18054 663 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 SERPINB9P50453 376 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ACTR3P61158 418 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 BRINP3Q76B58 766 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 TMEM120AQ9BXJ8 343 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CEP41Q9BYV8 373 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 THEGLP0DJG4 465 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CHMP24386 653 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 PRKAA2P54646 552 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 PDK2Q15119 407 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 PLET1Q6UQ28 207 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 DNAJB7Q7Z6W7 309 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 TTC5Q8N0Z6 440 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 GINM1Q9NU53 330 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MOCS1Q9NZB8 636 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 TYW5A2RUC4 315 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 SPDYE5A6NIY4 337 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ANGPTL1O95841 491 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 PTPN1P18031 435 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 HK1P19367 917 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 HNMTP50135 292 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 FAM109AQ8N4B1 249 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 RDH13Q8NBN7 331 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 TMEM87BQ96K49 555 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 IMPAD1Q9NX62 359 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 POFUT2Q9Y2G5 429 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 IREB2P48200 963 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MROH9Q5TGP6 573 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 UCMAQ8WVF2 138 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ELOVL6Q9H5J4 265 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 USE1Q9NZ43 259 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 TPRKBQ9Y3C4 175 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MRC2Q9UBG0 1479 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ATP6V1B1P15313 513 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 C16orf46Q6P387 395 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 GADL1Q6ZQY3 521 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 NKAIN4Q8IVV8 208 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 REPS2Q8NFH8 660 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ABHD10Q9NUJ1 306 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 KLHL11Q9NVR0 708 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 SRP68Q9UHB9 627 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MAFBQ9Y5Q3 323 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 A0A1W2PP64 1363 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 FAM189A1O60320 539 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 BCAS1O75363 584 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 NAMPTP43490 491 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CDK16Q00536 496 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 HMGN3Q15651 99 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF181Q2M3W8 571 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 AKAP4Q5JQC9 854 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 RNF219Q5W0B1 726 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CAMKVQ8NCB2 501 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CYGBQ8WWM9 190 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF224Q9NZL3 707 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 PTCH1Q13635 1447 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ALDH5A1P51649 535 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ABATP80404 500 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 SMU1Q2TAY7 513 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 SCYL2Q6P3W7 929 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CCNJLQ8IV13 435 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 NDNFQ8TB73 568 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 FKBP10Q96AY3 582 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 GDAP2Q9NXN4 497 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CFLARO15519 480 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 OLFM2O95897 454 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CDAN1Q8IWY9 1227 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 DHX40Q8IX18 779 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 C16orf71Q8IYS4 520 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 PTCD2Q8WV60 388 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 NUAK2Q9H093 628 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 RANBP3Q9H6Z4 567 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CATSPERZQ9NTU4 200 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF624Q9P2J8 865 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ERGIC3Q9Y282 383 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ENPP3O14638 875 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 ARFIP2P53365 341 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 SLFN12LQ6IEE8 588 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 RRAGAQ7L523 313 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 OR5J2Q8NH18 312 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 PBDC1Q9BVG4 233 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 MRPS30Q9NP92 439 aaKnown RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 PCDHA13Q9Y5I0 950 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM238LA0A1B0GVL6 79 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 MYO1GB0I1T2 1018 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 GNPATO15228 680 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 DDX6P26196 483 aaKnown RBP eCLIP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 REEP5Q00765 189 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF782Q6ZMW2 699 aaPredicted RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 NFATC2IPQ8NCF5 419 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 MRM3Q9HC36 420 aaKnown RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 H6PDO95479 791 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 PLEKHG6Q3KR16 790 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms