RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PRR23AA6NEV1 266 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 SYNCRIPO60506 623 aaKnown RBP19.81■□□□□ 0.76
SYNE4-202ENST00000340477 ADAM23O75077 832 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 RPP40O75818 363 aaKnown RBP19.81■□□□□ 0.76
SYNE4-202ENST00000340477 GJB6O95452 261 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 FTLP02792 175 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-202ENST00000340477 RFC1P35251 1148 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-202ENST00000340477 SIM2Q14190 667 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-202ENST00000340477 C15orf59Q2T9L4 293 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-202ENST00000340477 CCDC14Q49A88 953 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 FNDC3BQ53EP0 1204 aaKnown RBP19.81■□□□□ 0.76
SYNE4-202ENST00000340477 MBLAC2Q68D91 279 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 TRNP1Q6NT89 227 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 FBXL22Q6P050 247 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 SERPINA13PQ6UXR4 307 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 TMEM92Q6UXU6 159 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 FAM172AQ8WUF8 416 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 HMGB4Q8WW32 186 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 ZNF653Q96CK0 615 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 HAPLN3Q96S86 360 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 GABRG3Q99928 467 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 HINFPQ9BQA5 517 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 TAS2R14Q9NYV8 317 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 THAP10Q9P2Z0 257 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-202ENST00000340477 SMG5Q9UPR3 1016 aaKnown RBP19.81■□□□□ 0.76
SYNE4-202ENST00000340477 STON1Q9Y6Q2 735 aa19.81■□□□□ 0.76
SYNE4-202ENST00000340477 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ANTXRLA6NF34 631 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 DDX3XO00571 662 aaKnown RBP eCLIP19.8■□□□□ 0.765e-7■□□□□ 11.3
SYNE4-202ENST00000340477 CLDN11O75508 207 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ENDOD1O94919 500 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ASLP04424 464 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 CHRM1P11229 460 aaPredicted RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 CD70P32970 193 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ZNF143P52747 638 aaPredicted RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ST8SIA6P61647 398 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 LMAN2Q12907 356 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ZNF177Q13360 481 aaPredicted RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 SLC12A1Q13621 1099 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 USP39Q53GS9 565 aaKnown RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 RNF219Q5W0B1 726 aaPredicted RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 HGSNATQ68CP4 663 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 WDR59Q6PJI9 974 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 SARM1Q6SZW1 724 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 BNIPLQ7Z465 357 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ALYREFQ86V81 257 aaKnown RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 C11orf74Q86VG3 221 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 CCAR2Q8N163 923 aaKnown RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 WFDC5Q8TCV5 224 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 GAB3Q8WWW8 586 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 SPACA7Q96KW9 195 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 C1orf74Q96LT6 269 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ACOX2Q99424 681 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ANP32EQ9BTT0 268 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 ADAM33Q9BZ11 813 aa19.8■□□□□ 0.76
SYNE4-202ENST00000340477 MRPL47Q9HD33 250 aaKnown RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 CNOT8Q9UFF9 292 aaKnown RBP19.8■□□□□ 0.76
SYNE4-202ENST00000340477 DLDP09622 509 aaKnown RBP19.79■□□□□ 0.76
SYNE4-202ENST00000340477 ATXN1P54253 815 aaKnown RBP19.79■□□□□ 0.76
SYNE4-202ENST00000340477 CDH4P55283 916 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 BYSLQ13895 437 aaKnown RBP19.79■□□□□ 0.76
SYNE4-202ENST00000340477 ZNF234Q14588 700 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.79■□□□□ 0.76
SYNE4-202ENST00000340477 KIAA0907Q7Z7F0 614 aaPredicted RBP19.79■□□□□ 0.76
SYNE4-202ENST00000340477 RASSF3Q86WH2 238 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 CIR1Q86X95 450 aaPredicted RBP19.79■□□□□ 0.76
SYNE4-202ENST00000340477 DRC7Q8IY82 874 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 OR8K1Q8NGG5 319 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 MYEOVQ96EZ4 313 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 CNPY3Q9BT09 278 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 DEF6Q9H4E7 631 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 NCDNQ9UBB6 729 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 ADAMTS1Q9UHI8 967 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 GMEB2Q9UKD1 530 aa19.79■□□□□ 0.76
SYNE4-202ENST00000340477 PIEZO1Q92508 2521 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 ATMINO43313 823 aaPredicted RBP19.78■□□□□ 0.76
SYNE4-202ENST00000340477 GGCXP38435 758 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 IL12RB1P42701 662 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 FUT11Q495W5 492 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 PITRM1Q5JRX3 1037 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 ADIPOR2Q86V24 386 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 CNGA4Q8IV77 575 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 MDGA1Q8NFP4 955 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 OLIG1Q8TAK6 271 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 SORCS1Q8WY21 1168 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 TPSD1Q9BZJ3 242 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 HCN2Q9UL51 889 aa19.78■□□□□ 0.76
SYNE4-202ENST00000340477 EML5Q05BV3 1969 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 TCRBV5S1A1TA0A578 114 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 E9PAM4 449 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 CCP110O43303 1012 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 EPHX1P07099 455 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 PSMA2P25787 234 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 HNRNPH3P31942 346 aaKnown RBP19.77■□□□□ 0.76
SYNE4-202ENST00000340477 CSKP41240 450 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 RPL7AP62424 266 aaKnown RBP19.77■□□□□ 0.76
SYNE4-202ENST00000340477 SULT2A1Q06520 285 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 MAMLD1Q13495 774 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 EFHC2Q5JST6 749 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 PPP1R15BQ5SWA1 713 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms