RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PDK1Q15118 436 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 SLC1A5Q15758 541 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 ARL13BQ3SXY8 428 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 TAOK1Q7L7X3 1001 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 CTAGE3PQ8IX95 158 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 PPM1NQ8N819 430 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 MZB1Q8WU39 189 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 IRGQQ8WZA9 623 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 CNOT10Q9H9A5 744 aaKnown RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 TTLL3Q9Y4R7 772 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 HS3ST4Q9Y661 456 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 CCDC78A2IDD5 438 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 MTMR11A4FU01 709 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 TCP11X1B4DZS4 312 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 DFFAO00273 331 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 TOP3BO95985 862 aaKnown RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 F9P00740 461 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 VIMP08670 466 aaKnown RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 FGFR3P22607 806 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 FOXN2P32314 431 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 GARSP41250 739 aaKnown RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 GLUD2P49448 558 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 SEMA5AQ13591 1074 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 ZKSCAN8Q15776 578 aaPredicted RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 PSMD5Q16401 504 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 SPRED3Q2MJR0 410 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 PIK3R6Q5UE93 754 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 CASC4Q6P4E1 433 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 ADGRD1Q6QNK2 874 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 KDELC2Q7Z4H8 507 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 TFAP2DQ7Z6R9 452 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 CIR1Q86X95 450 aaPredicted RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 NPAS4Q8IUM7 802 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 CNTD1Q8N815 330 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 SPATA22Q8NHS9 363 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 AUTS2Q8WXX7 1259 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 ARNTL2Q8WYA1 636 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 THOC1Q96FV9 657 aaKnown RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 SERAC1Q96JX3 654 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 ELAC1Q9H777 363 aaKnown RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 CCSER2Q9H7U1 834 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 ALG13Q9NP73 1137 aaKnown RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 PNPLA8Q9NP80 782 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 ARHGEF38Q9NXL2 777 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 GGT7Q9UJ14 662 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 VANGL2Q9ULK5 521 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 PCDHB5Q9Y5E4 795 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 PRUNE2Q8WUY3 3088 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 TTC24A2A3L6 582 aaPredicted RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 SCAMP3O14828 347 aaKnown RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 SYN3O14994 580 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 TBC1D4O60343 1298 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 CNTN5O94779 1100 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 IVLP07476 585 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 TPH1P17752 444 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 ATF6P18850 670 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 MGAT1P26572 445 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 CCR1P32246 355 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 OR1D2P34982 312 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 MAGEA6P43360 314 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 TUBP50607 506 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 BMPR2Q13873 1038 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 CPLX4Q7Z7G2 160 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 MON1AQ86VX9 555 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 SPNS2Q8IVW8 549 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 ARHGAP12Q8IWW6 846 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 DCP1BQ8IZD4 617 aaKnown RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 OR52K1Q8NGK4 314 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 DPF3Q92784 378 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 ATP2A3Q93084 1043 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 CHMP6Q96FZ7 201 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 DHRS4Q9BTZ2 278 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 SLC39A8Q9C0K1 460 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 FGFR1OP2Q9NVK5 253 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 WDR70Q9NW82 654 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 KLHL8Q9P2G9 620 aaPredicted RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 PSMC3IPQ9P2W1 217 aaPredicted RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 SCML2Q9UQR0 700 aa7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 PRRC2BQ5JSZ5 2229 aaKnown RBP7.6□□□□□ -1.19
SRFBP1-201ENST00000339397 GOLGA6L7A0A1B0GV03 622 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 HMX2A2RU54 273 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 WDR91A4D1P6 747 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 KCNU1A8MYU2 1149 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 TRIM66O15016 1216 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 CSPG5O95196 566 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 MT-CYBP00156 380 aaPredicted RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 CSH1P0DML2 217 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 CSH2P0DML3 217 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 ACRP10323 421 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 MSH2P43246 934 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 DEFB103AP81534 67 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 IFT88Q13099 833 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 ARHGEF6Q15052 776 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 NFE2Q16621 373 aaPredicted RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 ALFQ53S48 1182 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 ZNF280DQ6N043 979 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 ANKRD33Q7Z3H0 272 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 CROCCP2Q86T23 111 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 TDRPQ86YL5 185 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 FBXO22Q8NEZ5 403 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms