RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 RMND1Q9NWS8 449 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 DKK4Q9UBT3 224 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 SUN2Q9UH99 717 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 ADAMTS20P59510 1910 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 TYW5A2RUC4 315 aaKnown RBP16.23■□□□□ 0.19
LINC01116-202ENST00000339037 FAM47DPA6NHR8 397 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 H0Y8X5 98 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 KCNK3O14649 394 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 PRCPP42785 496 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 RGS7P49802 495 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 ST8SIA6P61647 398 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 LRMPQ12912 555 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 CCDC157Q569K6 752 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 PMF1Q6P1K2 205 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 TMEM270Q6UE05 265 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 USP30Q70CQ3 517 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 UBR7Q8N806 425 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 HJURPQ8NCD3 748 aaPredicted RBP16.23■□□□□ 0.19
LINC01116-202ENST00000339037 GANCQ8TET4 914 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 SLC35F5Q8WV83 523 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 IRGQQ8WZA9 623 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 ACE2Q9BYF1 805 aaPredicted RBP16.23■□□□□ 0.19
LINC01116-202ENST00000339037 RSPH9Q9H1X1 276 aaPredicted RBP16.23■□□□□ 0.19
LINC01116-202ENST00000339037 STIM2Q9P246 746 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 ARMCX3Q9UH62 379 aaPredicted RBP16.23■□□□□ 0.19
LINC01116-202ENST00000339037 SCML1Q9UN30 329 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 NCKAP1Q9Y2A7 1128 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 PTPRBP23467 1997 aa16.23■□□□□ 0.19
LINC01116-202ENST00000339037 GOLGA6L7A0A1B0GV03 622 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 M0QYV0 167 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 PIK3R2O00459 728 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 ACSL4O60488 711 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 RNASEH1O60930 286 aaKnown RBP16.22■□□□□ 0.19
LINC01116-202ENST00000339037 LTFP02788 710 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 IGHV4-34P06331 123 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 PAEPP09466 180 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 SLC6A4P31645 630 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 CTSKP43235 329 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 C21orf59P57076 290 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 TBX4P57082 545 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 HNRNPA1L2Q32P51 320 aaKnown RBP16.22■□□□□ 0.19
LINC01116-202ENST00000339037 KCNT1Q5JUK3 1230 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 KIAA0895LQ68EN5 471 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 MARCH9Q86YJ5 346 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 HNRNPLLQ8WVV9 542 aaKnown RBP16.22■□□□□ 0.19
LINC01116-202ENST00000339037 TFAP2BQ92481 460 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 ERCC4Q92889 916 aaPredicted RBP16.22■□□□□ 0.19
LINC01116-202ENST00000339037 SLC35C1Q96A29 364 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 PRICKLE1Q96MT3 831 aaPredicted RBP16.22■□□□□ 0.19
LINC01116-202ENST00000339037 DDX50Q9BQ39 737 aaKnown RBP16.22■□□□□ 0.19
LINC01116-202ENST00000339037 ORAI3Q9BRQ5 295 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 PABPC3Q9H361 631 aaKnown RBP16.22■□□□□ 0.19
LINC01116-202ENST00000339037 MTG2Q9H4K7 406 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 FBXL12Q9NXK8 326 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 HELZ2Q9BYK8 2649 aaKnown RBP16.22■□□□□ 0.19
LINC01116-202ENST00000339037 KNTC1P50748 2209 aa16.22■□□□□ 0.19
LINC01116-202ENST00000339037 ASXL3Q9C0F0 2248 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 FAM149AA5PLN7 773 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 TRABD2BA6NFA1 517 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 DFNA5O60443 496 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 ASLP04424 464 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 CSKP41240 450 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 PMS1P54277 932 aaKnown RBP16.21■□□□□ 0.19
LINC01116-202ENST00000339037 RACK1P63244 317 aaKnown RBP16.21■□□□□ 0.19
LINC01116-202ENST00000339037 IL9RQ01113 521 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 SFSWAPQ12872 951 aaKnown RBP16.21■□□□□ 0.19
LINC01116-202ENST00000339037 CDH18Q13634 790 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 BECN1Q14457 450 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 SMAD1Q15797 465 aaKnown RBP16.21■□□□□ 0.19
LINC01116-202ENST00000339037 COBLL1Q53SF7 1204 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 ZNF658Q5TYW1 1059 aaPredicted RBP16.21■□□□□ 0.19
LINC01116-202ENST00000339037 ANKRD40Q6AI12 368 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 CCDC117Q8IWD4 279 aaPredicted RBP16.21■□□□□ 0.19
LINC01116-202ENST00000339037 FIBINQ8TAL6 211 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 CLEC4CQ8WTT0 213 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 AZIN2Q96A70 460 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 TTC17Q96AE7 1141 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 MYO19Q96H55 970 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 LMLNQ96KR4 655 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 SCUBE2Q9NQ36 999 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 FTSJ1Q9UET6 329 aa16.21■□□□□ 0.19
LINC01116-202ENST00000339037 A0A1W2PPC4 97 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 VILLO15195 856 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 PAPSS1O43252 624 aaPredicted RBP16.2■□□□□ 0.18
LINC01116-202ENST00000339037 SIN3BO75182 1162 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 RNASEH2AO75792 299 aaKnown RBP16.2■□□□□ 0.18
LINC01116-202ENST00000339037 FBXO21O94952 628 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 FMO5P49326 533 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 RPS24P62847 133 aaKnown RBP16.2■□□□□ 0.18
LINC01116-202ENST00000339037 LRRC63Q05C16 580 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 CYP4F3Q08477 520 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 STILQ15468 1287 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 CST6Q15828 149 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 CNGA2Q16280 664 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 NADSYN1Q6IA69 706 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 NCEH1Q6PIU2 408 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 DHX40Q8IX18 779 aaKnown RBP16.2■□□□□ 0.18
LINC01116-202ENST00000339037 PPM1KQ8N3J5 372 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 CARNMT1Q8N4J0 409 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 SKA1Q96BD8 255 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms