RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 COLGALT1Q8NBJ5 622 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 PDZD8Q8NEN9 1154 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 FCRL2Q96LA5 508 aaPredicted RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 SEPT5Q99719 369 aaPredicted RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 HERC2P3Q9BVR0 1158 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 SENP1Q9P0U3 644 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 PPARGC1AQ9UBK2 798 aaKnown RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 NEU3Q9UQ49 428 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 SLC27A5Q9Y2P5 690 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 WDR27A2RRH5 827 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 SMIM23A6NLE4 172 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 ERI2A8K979 691 aaKnown RBP16.71■□□□□ 0.27
HPS1-202ENST00000338546 TRDMT1O14717 391 aaKnown RBP16.71■□□□□ 0.27
HPS1-202ENST00000338546 ABLIM3O94929 683 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 APOEP02649 317 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 PBX3P40426 434 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 GEMIN4P57678 1058 aaKnown RBP16.71■□□□□ 0.27
HPS1-202ENST00000338546 TAF10Q12962 218 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 SNX30Q5VWJ9 437 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 ITPRIPL1Q6GPH6 555 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 PRSS55Q6UWB4 352 aaPredicted RBP16.71■□□□□ 0.27
HPS1-202ENST00000338546 CAND1Q86VP6 1230 aaKnown RBP16.71■□□□□ 0.27
HPS1-202ENST00000338546 CCNJLQ8IV13 435 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 TTC9BQ8N6N2 239 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 ATP6V0D2Q8N8Y2 350 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 ARHGEF2Q92974 986 aaKnown RBP16.71■□□□□ 0.27
HPS1-202ENST00000338546 TMEM169Q96HH4 297 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 CRISPLD1Q9H336 500 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 RABGEF1Q9UJ41 708 aa16.71■□□□□ 0.27
HPS1-202ENST00000338546 ZNF638Q14966 1978 aaKnown RBP16.71■□□□□ 0.27
HPS1-202ENST00000338546 SLC38A8A6NNN8 435 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 CCNCP24863 283 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 ELK3P41970 407 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 CYS1Q717R9 158 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 EXOC3L1Q86VI1 746 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 ANKMY2Q8IV38 441 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 ZNF567Q8N184 647 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 TAB3Q8N5C8 712 aaPredicted RBP16.7■□□□□ 0.26
HPS1-202ENST00000338546 NPWQ8N729 165 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 ZNF461Q8TAF7 563 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 MAML1Q92585 1016 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 BTN2A3PQ96KV6 586 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 CYTH2Q99418 400 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 WDR83Q9BRX9 315 aaKnown RBP16.7■□□□□ 0.26
HPS1-202ENST00000338546 VN1R3Q9BXE9 311 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 RETREG1Q9H6L5 497 aa16.7■□□□□ 0.26
HPS1-202ENST00000338546 MSI1O43347 362 aaKnown RBP16.69■□□□□ 0.26
HPS1-202ENST00000338546 IGLV3-27P01718 113 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 HSPA8P11142 646 aaKnown RBP16.69■□□□□ 0.26
HPS1-202ENST00000338546 RAG1P15918 1043 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 PTPN3P26045 913 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 STX2P32856 288 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 LSP1P33241 339 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 OR1D2P34982 312 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 WDR5P61964 334 aaKnown RBP16.69■□□□□ 0.26
HPS1-202ENST00000338546 SPOUT1Q5T280 376 aaKnown RBP16.69■□□□□ 0.26
HPS1-202ENST00000338546 RWDD4Q6NW29 188 aaKnown RBP16.69■□□□□ 0.26
HPS1-202ENST00000338546 LRRC8BQ6P9F7 803 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 KLHDC10Q6PID8 442 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 LRRC31Q6UY01 552 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 DDX53Q86TM3 631 aaKnown RBP16.69■□□□□ 0.26
HPS1-202ENST00000338546 DPF3Q92784 378 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 PPP1R2P1Q96PQ5 205 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 NAT9Q9BTE0 207 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 DHRS4Q9BTZ2 278 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 SIK2Q9H0K1 926 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 SPG21Q9NZD8 308 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 MARCH2Q9P0N8 246 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 PSMC3IPQ9P2W1 217 aaPredicted RBP16.69■□□□□ 0.26
HPS1-202ENST00000338546 HBS1LQ9Y450 684 aaKnown RBP16.69■□□□□ 0.26
HPS1-202ENST00000338546 HS3ST4Q9Y661 456 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 CEP350Q5VT06 3117 aa16.69■□□□□ 0.26
HPS1-202ENST00000338546 TRIM43BA6NCK2 446 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 E9PAM4 449 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 AP3B1O00203 1094 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 PSMD3O43242 534 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 SRGAP2BP0DMP2 458 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 GCAP28676 217 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 PPM1AP35813 382 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 TUBP50607 506 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 SLC18A1P54219 525 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 GUCY1A3Q02108 690 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 CREMQ03060 361 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 BTG3Q14201 252 aaPredicted RBP16.68■□□□□ 0.26
HPS1-202ENST00000338546 SKIDA1Q1XH10 827 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 TEX44Q53QW1 395 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 ARTNQ5T4W7 220 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 FAXCQ5TGI0 409 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 RASIP1Q5U651 963 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 AFMIDQ63HM1 303 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 NUGGCQ68CJ6 796 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 ZNF534Q76KX8 674 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 PID1Q7Z2X4 250 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 RTL3Q8N8U3 475 aaKnown RBP16.68■□□□□ 0.26
HPS1-202ENST00000338546 FATE1Q969F0 183 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 TRIM43Q96BQ3 446 aaPredicted RBP16.68■□□□□ 0.26
HPS1-202ENST00000338546 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 EPN3Q9H201 632 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 KLHL8Q9P2G9 620 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms