RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 VPS33AQ96AX1 596 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 RNF157Q96PX1 679 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 ACOX2Q99424 681 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 ADGRE3Q9BY15 652 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 ELOVL6Q9H5J4 265 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 COPS7BQ9H9Q2 264 aaPredicted RBP14.04□□□□□ -0.16
RTN4-202ENST00000337526 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 NMRK1Q9NWW6 199 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 UBIAD1Q9Y5Z9 338 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 CNTNAP2Q9UHC6 1331 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 COL5A2P05997 1499 aaPredicted RBP14.04□□□□□ -0.16
RTN4-202ENST00000337526 A0A0A0MRY4 1105 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 TPP1O14773 563 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 RPL14P50914 215 aaKnown RBP14.03□□□□□ -0.16
RTN4-202ENST00000337526 SAMD4BQ5PRF9 694 aaKnown RBP14.03□□□□□ -0.16
RTN4-202ENST00000337526 POLNQ7Z5Q5 900 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 SLC44A2Q8IWA5 706 aaPredicted RBP14.03□□□□□ -0.16
RTN4-202ENST00000337526 CERS5Q8N5B7 392 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 DNAJB3Q8WWF6 145 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 SPATA13Q96N96 652 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 SH3GL2Q99962 352 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 FGFBP2Q9BYJ0 223 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 PARVBQ9HBI1 364 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 PCDHB7Q9Y5E2 793 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 ASTN2O75129 1339 aaPredicted RBP14.03□□□□□ -0.16
RTN4-202ENST00000337526 LDLRP01130 860 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 RHOCP08134 193 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 MAPK1P28482 360 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 TAS2R40P59535 323 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 PWP1Q13610 501 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 CCDC103Q8IW40 242 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 OR5B17Q8NGF7 314 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 TMEM169Q96HH4 297 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 P2RX7Q99572 595 aaKnown RBP14.03□□□□□ -0.16
RTN4-202ENST00000337526 IKZF4Q9H2S9 585 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 XPNPEP3Q9NQH7 507 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 VPS28Q9UK41 221 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 ALOX15BO15296 676 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 BANF1O75531 89 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 RAP1GDS1P52306 607 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 GTF2A2P52657 109 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 FAM98BQ52LJ0 330 aaKnown RBP14.03□□□□□ -0.16
RTN4-202ENST00000337526 TRABD2AQ86V40 505 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 MPP4Q96JB8 637 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 DCUN1D5Q9BTE7 237 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 TAS2R13Q9NYV9 303 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 hCG_1818297A0A087WSY0 165 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 RHOAP61586 193 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 QPCTQ16769 361 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 UNC5AQ6ZN44 842 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 HOMEZQ8IX15 550 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 FAM126BQ8IXS8 530 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 PHF21AQ96BD5 680 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 MRIQ9BWK5 157 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 POPDC2Q9HBU9 364 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 ERVK-5Q9HDB9 667 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 MYRFQ9Y2G1 1151 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 ANKRD6Q9Y2G4 727 aa14.03□□□□□ -0.16
RTN4-202ENST00000337526 SPTLC1O15269 473 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 CKMP06732 381 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 SLC2A4P14672 509 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 CCT8P50990 548 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 BLVRAP53004 296 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 XRCC4Q13426 336 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 NEPROQ6NW34 567 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 RASGEF1CQ8N431 466 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 FNDC5Q8NAU1 212 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 OSCP1Q8WVF1 389 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 ZFYVE19Q96K21 471 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 ZFRQ96KR1 1074 aaKnown RBP14.02□□□□□ -0.16
RTN4-202ENST00000337526 SPATA16Q9BXB7 569 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 LRMDAQ9H2I8 198 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 EPS8L2Q9H6S3 715 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 KRT75O95678 551 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 DLGAP3O95886 979 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 MYL4P12829 197 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 CCDC130P13994 396 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 UBA1P22314 1058 aaKnown RBP14.02□□□□□ -0.16
RTN4-202ENST00000337526 POU1F1P28069 291 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 DDR1Q08345 913 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 PGS1Q32NB8 556 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 STK32CQ86UX6 486 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 TERB1Q8NA31 727 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 OR52K1Q8NGK4 314 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 ABHD8Q96I13 439 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 MAML3Q96JK9 1138 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 DPY30Q9C005 99 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 CDHR5Q9HBB8 845 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 COMMD8Q9NX08 183 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 TRPM5Q9NZQ8 1165 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 CLCA2Q9UQC9 943 aa14.02□□□□□ -0.16
RTN4-202ENST00000337526 KRT36O76013 467 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 POMCP01189 267 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 LTFP02788 710 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 OCM2P0CE71 109 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 OCMP0CE72 109 aaPredicted RBP14.02□□□□□ -0.17
RTN4-202ENST00000337526 PSMB4P28070 264 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 NOS2P35228 1153 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 PRMT9Q6P2P2 845 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 ISLR2Q6UXK2 745 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms