RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ZNF280BQ86YH2 543 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 TTC39CQ8N584 583 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 ARNTL2Q8WYA1 636 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 HSFY1Q96LI6 401 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 OLFM3Q96PB7 478 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 CHRAC1Q9NRG0 131 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 ABI2Q9NYB9 513 aaPredicted RBP9.09□□□□□ -0.95
SNCA-201ENST00000336904 SENP1Q9P0U3 644 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 CPSF2Q9P2I0 782 aaKnown RBP9.09□□□□□ -0.95
SNCA-201ENST00000336904 STAP1Q9ULZ2 295 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 TRPV2Q9Y5S1 764 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 MEI4A8MW99 385 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 CCL22O00626 93 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 SCAMP3O14828 347 aaKnown RBP9.09□□□□□ -0.95
SNCA-201ENST00000336904 MGRN1O60291 552 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 ALDOAP04075 364 aaKnown RBP9.09□□□□□ -0.95
SNCA-201ENST00000336904 GM2AP17900 193 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 PTPN3P26045 913 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 GRK4P32298 578 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 ACADSBP45954 432 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 CXCR3P49682 368 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 GATMP50440 423 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 ARFIP2P53365 341 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 ALDH18A1P54886 795 aaKnown RBP9.09□□□□□ -0.95
SNCA-201ENST00000336904 PDE1BQ01064 536 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 ZNF460Q14592 562 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 CRYMQ14894 314 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 RNF43Q68DV7 783 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 STRADAQ7RTN6 431 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 TFAP2DQ7Z6R9 452 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 NUDCD3Q8IVD9 361 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 PPP1R14CQ8TAE6 165 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 STK32AQ8WU08 396 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 RTP4Q96DX8 246 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 NCAPGQ9BPX3 1015 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 NMUR2Q9GZQ4 415 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 WDCPQ9H6R7 721 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 KCNK13Q9HB14 408 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 XPNPEP3Q9NQH7 507 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 G3BP2Q9UN86 482 aaKnown RBP9.09□□□□□ -0.95
SNCA-201ENST00000336904 SCN4AP35499 1836 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 GABRDO14764 452 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 UPP2O95045 317 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 TROVE2P10155 538 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNCA-201ENST00000336904 KDSRQ06136 332 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 SLC20A2Q08357 652 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 PCSK7Q16549 785 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 DDR2Q16832 855 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 N4BP2L1Q5TBK1 243 aaPredicted RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 CLNKQ7Z7G1 428 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 ZDHHC17Q8IUH5 632 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 TOP6BLQ8N6T0 577 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 GPATCH11Q8N954 259 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 MIPEPQ99797 713 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 COLEC11Q9BWP8 271 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 TBC1D10AQ9BXI6 508 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 SENP6Q9GZR1 1112 aaPredicted RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 TRPV6Q9H1D0 765 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 ZFATQ9P243 1243 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 PCDHA11Q9Y5I1 949 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 RALGAPA2Q2PPJ7 1873 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 PDCD11Q14690 1871 aaKnown RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 NT5C1B-RDH14C9J2C7 533 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 GJB3O75712 270 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 TBX18O95935 607 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 ENO1P06733 434 aaKnown RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 AXLP30530 894 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 CD68P34810 354 aaPredicted RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 GRIK1P39086 918 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 GLRBP48167 497 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 SNX16P57768 344 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 SEMA5AQ13591 1074 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 UBAP2LQ14157 1087 aaKnown RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 UPP1Q16831 310 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 HSF5Q4G112 596 aaPredicted RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 XKR4Q5GH76 650 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 RGMBQ6NW40 437 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 PLD6Q8N2A8 252 aaKnown RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 SLC7A6OSQ96CW6 309 aaPredicted RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 FAXDC2Q96IV6 333 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 CLPTM1LQ96KA5 538 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 MTG1Q9BT17 334 aaPredicted RBP9.08□□□□□ -0.96
SNCA-201ENST00000336904 KATNAL1Q9BW62 490 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 TRIM55Q9BYV6 548 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 BRD8Q9H0E9 1235 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 DNAJB4Q9UDY4 337 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 PLLPQ9Y342 182 aa9.08□□□□□ -0.96
SNCA-201ENST00000336904 HHLA1C9JL84 531 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 DCLK1O15075 740 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 AOC2O75106 756 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 GNAT1P11488 350 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 PRKAR2AP13861 404 aaKnown RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 CD1EP15812 388 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 AQP5P55064 265 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 DPYSQ14117 519 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 PDE1CQ14123 709 aaPredicted RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 POU6F1Q14863 301 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 PRKD1Q15139 912 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms