RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 PCDHB8Q9UN66 801 aa17.14■□□□□ 0.33
TMEM39B-201ENST00000336294 ZNF638Q14966 1978 aaKnown RBP17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 ALDH1A2O94788 518 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 PGAM1P18669 254 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 PTPN3P26045 913 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 CNTFP26441 200 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 MGAT1P26572 445 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 ALDH3A1P30838 453 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 CCNFP41002 786 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 ETV4P43268 484 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 CAP1Q01518 475 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 MGAT5Q09328 741 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 BNIP1Q12981 228 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 PREPLQ4J6C6 727 aaPredicted RBP17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 WLSQ5T9L3 541 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 GLB1LQ6UWU2 654 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 OTOAQ7RTW8 1153 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 SPATA2LQ8IUW3 424 aaPredicted RBP17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 FITM2Q8N6M3 262 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 DQX1Q8TE96 717 aaKnown RBP17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 TTC17Q96AE7 1141 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 HDAC11Q96DB2 347 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 FAM111AQ96PZ2 611 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 C12orf65Q9H3J6 166 aaKnown RBP17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 GPBP1L1Q9HC44 474 aaPredicted RBP17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 MKS1Q9NXB0 559 aa17.13■□□□□ 0.33
TMEM39B-201ENST00000336294 KCNK1O00180 336 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 UGT1A9O60656 530 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 EOMESO95936 686 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 ITGB1P05556 798 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 CYP2C18P33260 490 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 SESN2P58004 480 aaPredicted RBP17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 NCALDP61601 193 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 YWHAHQ04917 246 aaPredicted RBP17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 GALNT2Q10471 571 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 NAB1Q13506 487 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 SETDB1Q15047 1291 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 MARK2Q7KZI7 788 aaKnown RBP17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 NPWQ8N729 165 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 CDKL2Q92772 493 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 OXNAD1Q96HP4 312 aaPredicted RBP17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 SRPK1Q96SB4 655 aaKnown RBP17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 ECT2Q9H8V3 914 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 UGT1A7Q9HAW7 530 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 UGT1A10Q9HAW8 530 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 UGT1A8Q9HAW9 530 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 TRHDEQ9UKU6 1024 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 PATJQ8NI35 1801 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 RFPL1O75677 317 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 TROVE2P10155 538 aaKnown RBP eCLIP17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 CKBP12277 381 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 EPHB2P29323 1055 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 BMPR2Q13873 1038 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 MAP3K21Q5TCX8 1036 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 OSBPL2Q9H1P3 480 aa17.12■□□□□ 0.33
TMEM39B-201ENST00000336294 KIF3CO14782 793 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 DCTN3O75935 186 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 LRIG2O94898 1065 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 ATP6V1G2O95670 118 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 IGLV3-25P01717 112 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 NEFHP12036 1026 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 NQO1P15559 274 aaKnown RBP17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 GARSP41250 739 aaKnown RBP17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 CRADDP78560 199 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 NOGQ13253 232 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 CRYMQ14894 314 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 ITPRIPL1Q6GPH6 555 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 TIFABQ6ZNK6 161 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 URGCPQ8TCY9 931 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 ZNF398Q8TD17 642 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 C10orf82Q8WW14 230 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 ARNTL2Q8WYA1 636 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 THOC1Q96FV9 657 aaKnown RBP17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 VAT1Q99536 393 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 ABCC13Q9NSE7 274 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 SYBUQ9NX95 663 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 SRRDQ9UH36 339 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 SNX10Q9Y5X0 201 aa17.11■□□□□ 0.33
TMEM39B-201ENST00000336294 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 MOXD2PA6NHM9 499 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 ERI2A8K979 691 aaKnown RBP17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 F8W810 466 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 AP2A1O95782 977 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 HOXD10P28358 340 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 GRIK1P39086 918 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 SERPINB4P48594 390 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 SLC5A3P53794 718 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 COG7P83436 770 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 NIPAL4Q0D2K0 466 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 FRMPD3Q5JV73 1810 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 SPDYAQ5MJ70 313 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 BRMS1LQ5PSV4 323 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 BTBD8Q5XKL5 378 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 NLRC5Q86WI3 1866 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 SCAMP5Q8TAC9 235 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 TSSK1BQ9BXA7 367 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 GBA3Q9H227 469 aa17.1■□□□□ 0.33
TMEM39B-201ENST00000336294 ARHGEF38Q9NXL2 777 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms