RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 HSF5Q4G112 596 aaPredicted RBP18.18■□□□□ 0.5
LRCH3-201ENST00000334859 ACMSDQ8TDX5 336 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 PPP1R10Q96QC0 940 aaKnown RBP18.18■□□□□ 0.5
LRCH3-201ENST00000334859 AP5M1Q9H0R1 490 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 CRTAC1Q9NQ79 661 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 TAS2R1Q9NYW7 299 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 TIMM13Q9Y5L4 95 aaPredicted RBP18.18■□□□□ 0.5
LRCH3-201ENST00000334859 HAS3O00219 553 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 DCLK1O15075 740 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 ZNF865P0CJ78 1059 aaPredicted RBP18.18■□□□□ 0.5
LRCH3-201ENST00000334859 NCAM1P13591 858 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 ERCC2P18074 760 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 KCNA4P22459 653 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 ADRA1BP35368 520 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 MAP2K5Q13163 448 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 TAF11Q15544 211 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 CCL14Q16627 93 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 CTU1Q7Z7A3 348 aaKnown RBP18.18■□□□□ 0.5
LRCH3-201ENST00000334859 KIRREL3Q8IZU9 778 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 TEX9Q8N6V9 391 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 ENDOVQ8N8Q3 282 aaKnown RBP18.18■□□□□ 0.5
LRCH3-201ENST00000334859 SENP8Q96LD8 212 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 SYT15Q9BQS2 421 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 TSPYL2Q9H2G4 693 aaPredicted RBP18.18■□□□□ 0.5
LRCH3-201ENST00000334859 THAP1Q9NVV9 213 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 IGSF9Q9P2J2 1179 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 EMCNQ9ULC0 261 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 GABRDO14764 452 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 CAPN15O75808 1086 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 CCNG1P51959 295 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 ALDH18A1P54886 795 aaKnown RBP18.17■□□□□ 0.5
LRCH3-201ENST00000334859 NAB1Q13506 487 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 PDZD4Q76G19 769 aaPredicted RBP18.17■□□□□ 0.5
LRCH3-201ENST00000334859 GPRIN1Q7Z2K8 1008 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 FAM35AQ86V20 835 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 OR52K1Q8NGK4 314 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 CERS2Q96G23 380 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 KCNK16Q96T55 309 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 GEMIN8Q9NWZ8 242 aaKnown RBP18.17■□□□□ 0.5
LRCH3-201ENST00000334859 DDIT4Q9NX09 232 aa18.17■□□□□ 0.5
LRCH3-201ENST00000334859 E2F8A0AVK6 867 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 LYPLA1O75608 230 aaPredicted RBP18.16■□□□□ 0.5
LRCH3-201ENST00000334859 FBXO21O94952 628 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 FYNP06241 537 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 USP17L7P0C7H9 530 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 PTPN3P26045 913 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 SESN3P58005 492 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 DAOAP59103 153 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 KPNB1Q14974 876 aaKnown RBP18.16■□□□□ 0.5
LRCH3-201ENST00000334859 KHDC1Q4VXA5 237 aaKnown RBP18.16■□□□□ 0.5
LRCH3-201ENST00000334859 FAM91A1Q658Y4 838 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 MBLAC2Q68D91 279 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 TREML1Q86YW5 311 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 ATXN7L3BQ96GX2 97 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 DCLRE1BQ9H816 532 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 ANLNQ9NQW6 1124 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 SCN4AP35499 1836 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 TSC2P49815 1807 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 ZNF236Q9UL36 1845 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 PLIN3O60664 434 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 LMNAP02545 664 aaKnown RBP18.16■□□□□ 0.5
LRCH3-201ENST00000334859 KDSRQ06136 332 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 MORN1Q5T089 497 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 DNAAF3Q8N9W5 541 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 ZNF669Q96BR6 464 aaPredicted RBP18.16■□□□□ 0.5
LRCH3-201ENST00000334859 PCED1BQ96HM7 432 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 KATNAL1Q9BW62 490 aa18.16■□□□□ 0.5
LRCH3-201ENST00000334859 MYBPHLA2RUH7 354 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 CAPN14A8MX76 684 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 B2RBV5 119 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 AMHP03971 560 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 TYK2P29597 1187 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 PTDSS1P48651 473 aaKnown RBP18.15■□□□□ 0.5
LRCH3-201ENST00000334859 PPM1JQ5JR12 505 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 NPWQ8N729 165 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 SH3TC2Q8TF17 1288 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 NTAN1Q96AB6 310 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 GAD1Q99259 594 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 SMOQ99835 787 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 LBHD1Q9BQE6 289 aaPredicted RBP18.15■□□□□ 0.5
LRCH3-201ENST00000334859 EBF4Q9BQW3 602 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 WDR6Q9NNW5 1121 aaKnown RBP18.15■□□□□ 0.5
LRCH3-201ENST00000334859 SLC38A7Q9NVC3 462 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 VANGL2Q9ULK5 521 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 MAGED2Q9UNF1 606 aaPredicted RBP18.15■□□□□ 0.5
LRCH3-201ENST00000334859 I6L893 689 aaPredicted RBP18.15■□□□□ 0.5
LRCH3-201ENST00000334859 ITM2AO43736 263 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 GSRP00390 522 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 GNAT1P11488 350 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 PGM1P36871 562 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 GP5P40197 560 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 GARSP41250 739 aaKnown RBP18.15■□□□□ 0.5
LRCH3-201ENST00000334859 CACNA2D1P54289 1103 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 RCN1Q15293 331 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 CCDC6Q16204 474 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 SPANXN3Q5MJ09 141 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 STXBP5Q5T5C0 1151 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 WDR75Q8IWA0 830 aaKnown RBP18.15■□□□□ 0.5
LRCH3-201ENST00000334859 ARHGAP24Q8N264 748 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms