RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CUL2Q13617 745 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 BBS12Q6ZW61 710 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 GRIN3AQ8TCU5 1115 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 AGR3Q8TD06 166 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 GPATCH1Q9BRR8 931 aaKnown RBP18.59■□□□□ 0.57
PKP3-201ENST00000331563 ARMC7Q9H6L4 198 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 ACAD9Q9H845 621 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 KMT5AQ9NQR1 393 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 SMYD2Q9NRG4 433 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 TRNAU1APQ9NX07 287 aaKnown RBP18.59■□□□□ 0.57
PKP3-201ENST00000331563 WDR64B1ANS9 1081 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 FUCA1P04066 466 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 CALB1P05937 261 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 DMP1Q13316 513 aaPredicted RBP18.59■□□□□ 0.57
PKP3-201ENST00000331563 ZFP1Q6P2D0 407 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 MAVSQ7Z434 540 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 ADGRF2Q8IZF7 708 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 LILRA2Q8N149 483 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 GPD1LQ8N335 351 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 ZNF516Q92618 1163 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 USP13Q92995 863 aaPredicted RBP18.59■□□□□ 0.57
PKP3-201ENST00000331563 THAP11Q96EK4 314 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 HGH1Q9BTY7 390 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 HOXC10Q9NYD6 342 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 EPS15L1Q9UBC2 864 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 RIMS3Q9UJD0 308 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 PHIPQ8WWQ0 1821 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 H7C0C1 242 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 DGKIO75912 1065 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 XRCC1P18887 633 aaPredicted RBP18.59■□□□□ 0.57
PKP3-201ENST00000331563 OSBPP22059 807 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 ATP5OP48047 213 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 TRPC1P48995 793 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 THOP1P52888 689 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 YWHAZP63104 245 aaKnown RBP18.59■□□□□ 0.57
PKP3-201ENST00000331563 ROR1Q01973 937 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 SEPT6Q14141 434 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 ZNF394Q53GI3 561 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 N4BP2L1Q5TBK1 243 aaPredicted RBP18.59■□□□□ 0.57
PKP3-201ENST00000331563 MBLAC2Q68D91 279 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 FASTKD5Q7L8L6 764 aaKnown RBP18.59■□□□□ 0.57
PKP3-201ENST00000331563 NIPA1Q7RTP0 329 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 DDHD1Q8NEL9 900 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 DEPDC1BQ8WUY9 529 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 HSPH1Q92598 858 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 C12orf42Q96LP6 360 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 ADARB2Q9NS39 739 aaKnown RBP18.59■□□□□ 0.57
PKP3-201ENST00000331563 BCAP29Q9UHQ4 241 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 PADI4Q9UM07 663 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 PARP14Q460N5 1801 aa18.58■□□□□ 0.57
PKP3-201ENST00000331563 STAM2O75886 525 aa18.58■□□□□ 0.57
PKP3-201ENST00000331563 APRTP07741 180 aa18.58■□□□□ 0.57
PKP3-201ENST00000331563 KCNA2P16389 499 aa18.58■□□□□ 0.57
PKP3-201ENST00000331563 TCN1P20061 433 aaPredicted RBP18.58■□□□□ 0.57
PKP3-201ENST00000331563 ESRRGP62508 458 aa18.58■□□□□ 0.57
PKP3-201ENST00000331563 HADHQ16836 314 aaKnown RBP18.58■□□□□ 0.57
PKP3-201ENST00000331563 CCDC60Q8IWA6 550 aaPredicted RBP18.58■□□□□ 0.57
PKP3-201ENST00000331563 LENG8Q96PV6 779 aaPredicted RBP18.58■□□□□ 0.57
PKP3-201ENST00000331563 RTKNQ9BST9 563 aa18.58■□□□□ 0.57
PKP3-201ENST00000331563 SLC38A7Q9NVC3 462 aa18.58■□□□□ 0.57
PKP3-201ENST00000331563 NOX1Q9Y5S8 564 aa18.58■□□□□ 0.57
PKP3-201ENST00000331563 CSADQ9Y600 493 aa18.58■□□□□ 0.57
PKP3-201ENST00000331563 CDH3P22223 829 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 TCF7P36402 384 aaPredicted RBP18.58■□□□□ 0.56
PKP3-201ENST00000331563 NPTX2P47972 431 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 KLF10Q13118 480 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 ATP1A4Q13733 1029 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 USP41Q3LFD5 358 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 PEX5LQ8IYB4 626 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 TMEM161BQ8NDZ6 487 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 ZNF606Q8WXB4 792 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 CEP170P1Q96L14 293 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 NSMCE3Q96MG7 304 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 SEMA6AQ9H2E6 1030 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 FAM96AQ9H5X1 160 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 MYRFQ9Y2G1 1151 aa18.58■□□□□ 0.56
PKP3-201ENST00000331563 IQCA1LA6NCM1 817 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 FAM189A1O60320 539 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 H6PDO95479 791 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 MYL4P12829 197 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 ACO1P21399 889 aaKnown RBP18.57■□□□□ 0.56
PKP3-201ENST00000331563 KDELR1P24390 212 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 CDH15P55291 814 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 PPP2R5DQ14738 602 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 TRMT10BQ6PF06 316 aaKnown RBP18.57■□□□□ 0.56
PKP3-201ENST00000331563 NPNTQ6UXI9 565 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 BNC2Q6ZN30 1099 aaPredicted RBP18.57■□□□□ 0.56
PKP3-201ENST00000331563 BSNDQ8WZ55 320 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 PPP1R36Q96LQ0 422 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 TMEM79Q9BSE2 394 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 FRMD8P1Q9BZ68 369 aaPredicted RBP18.57■□□□□ 0.56
PKP3-201ENST00000331563 GCOM2Q9BZD3 368 aaPredicted RBP18.57■□□□□ 0.56
PKP3-201ENST00000331563 EBF1Q9UH73 591 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 PCDHA10Q9Y5I2 948 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 C3orf70A6NLC5 250 aaPredicted RBP18.57■□□□□ 0.56
PKP3-201ENST00000331563 APOEP02649 317 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 PGK2P07205 417 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 KRT7P08729 469 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 FGF3P11487 239 aaPredicted RBP18.57■□□□□ 0.56
PKP3-201ENST00000331563 ENO3P13929 434 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms