RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CHMP6Q96FZ7 201 aa16.33■□□□□ 0.2
PDGFB-201ENST00000331163 CCDC77Q9BR77 488 aa16.33■□□□□ 0.2
PDGFB-201ENST00000331163 MARCH5Q9NX47 278 aa16.33■□□□□ 0.2
PDGFB-201ENST00000331163 H0Y626 953 aa16.33■□□□□ 0.2
PDGFB-201ENST00000331163 ATP5C1P36542 298 aaKnown RBP16.33■□□□□ 0.2
PDGFB-201ENST00000331163 RPS24P62847 133 aaKnown RBP16.33■□□□□ 0.2
PDGFB-201ENST00000331163 ITIH3Q06033 890 aa16.33■□□□□ 0.2
PDGFB-201ENST00000331163 YTHDF3Q7Z739 585 aaKnown RBP16.33■□□□□ 0.2
PDGFB-201ENST00000331163 CALR3Q96L12 384 aaKnown RBP16.33■□□□□ 0.2
PDGFB-201ENST00000331163 TRIM56Q9BRZ2 755 aaKnown RBP16.33■□□□□ 0.2
PDGFB-201ENST00000331163 RBBP6Q7Z6E9 1792 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 EXOC1LA0A1B0GW35 172 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 DPYSL4O14531 572 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 SHBGP04278 402 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 HSPA9P38646 679 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 CCNHP51946 323 aaPredicted RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 ELF3P78545 371 aaPredicted RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 SARNPP82979 210 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 DHX34Q14147 1143 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 DNAJB7Q7Z6W7 309 aaPredicted RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 LRRC34Q8IZ02 419 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 PPM1NQ8N819 430 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 TFB1MQ8WVM0 346 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 PRMT1Q99873 361 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 KLC2Q9H0B6 622 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 INTS9Q9NV88 658 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 TMEM59LQ9UK28 342 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 INSL6Q9Y581 213 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 ANP32DO95626 131 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 CNPP09543 421 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 LAG3P18627 525 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 TMPRSS15P98073 1019 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 PKN2Q16513 984 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 MON1AQ86VX9 555 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 PLD5Q8N7P1 536 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 DNAJC5GQ8N7S2 189 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 FSD1LQ9BXM9 530 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 HOMER3Q9NSC5 361 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 HCFC1R1Q9NWW0 138 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 TYW5A2RUC4 315 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 HIDE1A8MVS5 230 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 LIASO43766 372 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 DGKIO75912 1065 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 SLC25A11Q02978 314 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 HIF1AQ16665 826 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 TRAF7Q6Q0C0 670 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 C6orf89Q6UWU4 347 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 LINGO4Q6UY18 593 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 XPO6Q96QU8 1125 aaKnown RBP16.32■□□□□ 0.2
PDGFB-201ENST00000331163 NT5MQ9NPB1 228 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 FAM8A1Q9UBU6 413 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 CDH22Q9UJ99 828 aa16.32■□□□□ 0.2
PDGFB-201ENST00000331163 ATG2BQ96BY7 2078 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 SCN10AQ9Y5Y9 1956 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 C2orf78A6NCI8 922 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 OR6C75A6NL08 312 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 SSTR1P30872 391 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 SATB1Q01826 763 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 CCNG2Q16589 344 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 RASIP1Q5U651 963 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 RFX8Q6ZV50 586 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 ANKRD33Q7Z3H0 272 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 SPPL2BQ8TCT7 592 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 IL23AQ9NPF7 189 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 A8MUI8 341 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 FSCN2O14926 492 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 SYN3O14994 580 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 MAN1A1P33908 653 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 CUL1Q13616 776 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 ZDHHC17Q8IUH5 632 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 HS6ST3Q8IZP7 471 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 TM6SF2Q9BZW4 377 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 CCT8L1PA6NM43 557 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 SLC38A8A6NNN8 435 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 RNF103O00237 685 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 SEC24AO95486 1093 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 GLUD1P00367 558 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 TYMPP19971 482 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 KCNJ2P63252 427 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 IFI35P80217 286 aaPredicted RBP16.31■□□□□ 0.2
PDGFB-201ENST00000331163 ENPEPQ07075 957 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 DSC1Q08554 894 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 FASTKD3Q14CZ7 662 aaKnown RBP16.31■□□□□ 0.2
PDGFB-201ENST00000331163 HECTD3Q5T447 861 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 SRRM1Q8IYB3 904 aaKnown RBP16.31■□□□□ 0.2
PDGFB-201ENST00000331163 EFHBQ8N7U6 833 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 TMEM174Q8WUU8 243 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 SUDS3Q9H7L9 328 aaPredicted RBP16.31■□□□□ 0.2
PDGFB-201ENST00000331163 TLE6Q9H808 572 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 ZDHHC4Q9NPG8 344 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 ABCF3Q9NUQ8 709 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 YIPF1Q9Y548 306 aa16.31■□□□□ 0.2
PDGFB-201ENST00000331163 F9P00740 461 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 RPL22P35268 128 aaKnown RBP16.3■□□□□ 0.2
PDGFB-201ENST00000331163 CDH18Q13634 790 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 CCDC85BQ15834 202 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-201ENST00000331163 FAM26DQ5JW98 314 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 STXBP5Q5T5C0 1151 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 KREMEN2Q8NCW0 462 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 GDAP1Q8TB36 358 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms