RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 NLGN3Q9NZ94 848 aa15.42■□□□□ 0.06
CTHRC1-201ENST00000330295 ACSL6Q9UKU0 697 aa15.42■□□□□ 0.06
CTHRC1-201ENST00000330295 CLIC4Q9Y696 253 aa15.42■□□□□ 0.06
CTHRC1-201ENST00000330295 ZFHX3Q15911 3703 aa15.42■□□□□ 0.06
CTHRC1-201ENST00000330295 MED13Q9UHV7 2174 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 A8MXQ7 604 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 TCEA3O75764 348 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 AGFG2O95081 481 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 DLDP09622 509 aaKnown RBP15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 CORO1AP31146 461 aaKnown RBP15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 ADPRHP54922 357 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 PPP2CBP62714 309 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 PPP2CAP67775 309 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 CEBPZQ03701 1054 aaKnown RBP15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 MANEAQ5SRI9 462 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 DYMQ7RTS9 669 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 ADIPOR2Q86V24 386 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 ATCAYQ86WG3 371 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 OR5B17Q8NGF7 314 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 DCLK3Q9C098 648 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 ST6GALNAC4Q9H4F1 302 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 SRPRBQ9Y5M8 271 aaKnown RBP15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 F8P00451 2351 aa15.41■□□□□ 0.06
CTHRC1-201ENST00000330295 CELSR2Q9HCU4 2923 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 RTN2O75298 545 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 AP1G2O75843 785 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 PIAS2O75928 621 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 LDHAP00338 332 aaKnown RBP15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 TNNC2P02585 160 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 FAM163BP0C2L3 166 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 ZSCAN22P10073 491 aaPredicted RBP15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 LIPCP11150 499 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 RARGP13631 454 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 CD97P48960 835 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 KCNAB2Q13303 367 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 STAT4Q14765 748 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 SLC39A14Q15043 492 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 STK38Q15208 465 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 KRTAP21-3Q3LHN1 58 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 TMEM119Q4V9L6 283 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 VASH2Q86V25 355 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 JAMLQ86YT9 394 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 ZC3H3Q8IXZ2 948 aaKnown RBP15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 CPXM2Q8N436 756 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 ZMIZ2Q8NF64 920 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 OR14C36Q8NHC7 312 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 TPCN2Q8NHX9 752 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 NMUR1Q9HB89 426 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 KRT82Q9NSB4 513 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 KLHL11Q9NVR0 708 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 ARHGAP20Q9P2F6 1191 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 AGO1Q9UL18 857 aaKnown RBP15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 SCML2Q9UQR0 700 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 RP1P56715 2156 aa15.4■□□□□ 0.06
CTHRC1-201ENST00000330295 DOCK9Q9BZ29 2069 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 GOLGA8IPA6NC78 632 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 GOLGA8JA6NMD2 632 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 SIN3BO75182 1162 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 TBCAO75347 108 aaKnown RBP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 KRT18P05783 430 aaKnown RBP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 WT1P19544 449 aaPredicted RBP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 HOXD9P28356 352 aaPredicted RBP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 ZNF177Q13360 481 aaPredicted RBP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 ATL3Q6DD88 541 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 BORAQ6PGQ7 559 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 SND1Q7KZF4 910 aaKnown RBP eCLIP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 PRPF39Q86UA1 669 aaKnown RBP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 HVCN1Q96D96 273 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 SMOQ99835 787 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 DUSP23Q9BVJ7 150 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 KDM4CQ9H3R0 1056 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 ABCB8Q9NUT2 735 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 SEPT10Q9P0V9 454 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 TUBD1Q9UJT1 453 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 DMTF1Q9Y222 760 aa15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 MORC2Q9Y6X9 1032 aaPredicted RBP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 SPENQ96T58 3664 aaKnown RBP15.39■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3DA0A087WVF3 549 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3IA0A087WXS9 549 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3EA0A087X179 549 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3KA0A087X1G2 549 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 A0A1W2PQH9 124 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 CPED1A4D0V7 1026 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3FA6NER0 549 aaPredicted RBP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 NEMP2A6NFY4 417 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3LB9A6J9 549 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 K7ESM1 405 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 PLD2O14939 933 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 BEST1O76090 585 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 ATP5BP06576 529 aaKnown RBP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3HP0C7X1 549 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 GOT1P17174 413 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 SLC8A1P32418 973 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 DDIT3P35638 169 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 PDX1P52945 283 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 OXCT1P55809 520 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 POLE2P56282 527 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 COG7P83436 770 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms