RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PDK1Q15118 436 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 CERCAMQ5T4B2 595 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 TEDDM1Q5T9Z0 273 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 TWF2Q6IBS0 349 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 ZNF483Q8TF39 744 aaPredicted RBP13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 TMA16Q96EY4 203 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 ECSITQ9BQ95 431 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 MMADHCQ9H3L0 296 aaPredicted RBP13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 RBPJLQ9UBG7 517 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 DCDC2Q9UHG0 476 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 STAP1Q9ULZ2 295 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 LIN7AO14910 233 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 MDM4O15151 490 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 DYNC1LI2O43237 492 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 MT-CO1P00395 513 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 NCAM1P13591 858 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 EPHA3P29320 983 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 SPRP35270 261 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 POU5F1BQ06416 359 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 CDC16Q13042 620 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 LAMC2Q13753 1193 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 USP10Q14694 798 aaKnown RBP13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 GALNT4Q8N4A0 578 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 TTC39CQ8N584 583 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 ZNF781Q8N8C0 355 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 MCUQ8NE86 351 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 CMTM5Q96DZ9 223 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 GCNAQ96QF7 691 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 NUF2Q9BZD4 464 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 EBF3Q9H4W6 596 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 DDIT4Q9NX09 232 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 VANGL2Q9ULK5 521 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 SNX10Q9Y5X0 201 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 AK5Q9Y6K8 562 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 A6NHS1 94 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 ASB14A6NK59 587 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 PGAM1P18669 254 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 PEX2P28328 305 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 ABCE1P61221 599 aaKnown RBP13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 IRF9Q00978 393 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 PAN2Q504Q3 1202 aaKnown RBP13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 ZNF534Q76KX8 674 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 ST13P4Q8IZP2 240 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 GDPD5Q8WTR4 605 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 SLC35F5Q8WV83 523 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 QKIQ96PU8 341 aaKnown RBP eCLIP13.21□□□□□ -0.294e-11■■■□□ 15.5
HMGCS1-201ENST00000325110 TUBGCP5Q96RT8 1024 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.29
HMGCS1-201ENST00000325110 KPNA7A9QM74 516 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 MAGEC1O60732 1142 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 GCATO75600 419 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 JCHAINP01591 159 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 CCR10P46092 362 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 ACTR3P61158 418 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 HSF5Q4G112 596 aaPredicted RBP13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 ZNF567Q8N184 647 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 OR6J1Q8NGC5 347 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 GTSE1Q9NYZ3 720 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 COPG2Q9UBF2 871 aa13.21□□□□□ -0.3
HMGCS1-201ENST00000325110 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 DFFAO00273 331 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 KLF11O14901 512 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 ENDOD1O94919 500 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 LYNP07948 512 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 ATP6V1B1P15313 513 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 NR2C2P49116 596 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 FSCBQ5H9T9 825 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 MTHFD1LQ6UB35 978 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 SH2D5Q6ZV89 423 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 ARCQ7LC44 396 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 PLD6Q8N2A8 252 aaKnown RBP13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 TDRD5Q8NAT2 981 aaKnown RBP13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 CATSPER2Q96P56 530 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 COG4Q9H9E3 785 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 PLAC1Q9HBJ0 212 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 PGM3O95394 542 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 AMHP03971 560 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 TPSB2P20231 275 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 IDH3AP50213 366 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 INCA1Q0VD86 236 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 MPP3Q13368 585 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 ART3Q13508 389 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 TPSAB1Q15661 275 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 DPYSL2Q16555 572 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 TEX44Q53QW1 395 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 SYPL2Q5VXT5 272 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 SNX32Q86XE0 403 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 OPTNQ96CV9 577 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 SLC4A5Q9BY07 1137 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 ARHGAP26Q9UNA1 814 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 SSX2IPQ9Y2D8 614 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 CITO14578 2027 aa13.2□□□□□ -0.3
HMGCS1-201ENST00000325110 BIRC5O15392 142 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 FGF3P11487 239 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CYP2C9P11712 490 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 TKTL1P51854 596 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms