RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 LRRC14Q15048 493 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 RFX4Q33E94 735 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 RBM43Q6ZSC3 357 aaKnown RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 SLC25A23Q9BV35 468 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 RIOX1Q9H6W3 641 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 ACTR8Q9H981 624 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 CISHQ9NSE2 258 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 FAM49BQ9NUQ9 324 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 TFRCP02786 760 aaKnown RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 RGS7P49802 495 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 ANKRD23Q86SG2 305 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 IL17RAQ96F46 866 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 TRAPPC9Q96Q05 1148 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 EXOSC4Q9NPD3 245 aaKnown RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 ABCC13Q9NSE7 274 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 AKAP11Q9UKA4 1901 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 XPO1O14980 1071 aaKnown RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 UBDO15205 165 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 MSH4O15457 936 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 RCVRNP35243 200 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 HLA-DQA1Q5Y7H0 255 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 KLHL35Q6PF15 583 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 MSL3Q8N5Y2 521 aaKnown RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 TRIT1Q9H3H1 467 aaKnown RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 GPAMQ9HCL2 828 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 ZBTB14O43829 449 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 MGRN1O60291 552 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 DENND6AQ8IWF6 608 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 RORBQ92753 470 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 AGO4Q9HCK5 861 aaKnown RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 KCNK4Q9NYG8 393 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 PHTF1Q9UMS5 762 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 HIST1H2ABP04908 130 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 DGKAP23743 735 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 LGALS3BPQ08380 585 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 E2F4Q16254 413 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 CTXN3Q4LDR2 81 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 TXNDC11Q6PKC3 985 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 HIST3H2AQ7L7L0 130 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 UNC93AQ86WB7 457 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 GLMNQ92990 594 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 HIST1H2ACQ93077 130 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 FAXDC2Q96IV6 333 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 BCL10O95999 233 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 MBL2P11226 248 aaPredicted RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 ANGPT1Q15389 498 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 SMTNL2Q2TAL5 461 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 LRRC38Q5VT99 294 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 AGR3Q8TD06 166 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 NRDE2Q9H7Z3 1164 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 MORF4L1Q9UBU8 362 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 NQO1P15559 274 aaKnown RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 FKBP1BP68106 108 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 PKN1Q16512 942 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 IQSEC1Q6DN90 963 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 ATG16L2Q8NAA4 619 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 OR52L1Q8NGH7 329 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 RSL24D1Q9UHA3 163 aaKnown RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 SNAPC5O75971 98 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 GSTM1P09488 218 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 COPZ1P61923 177 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 ST3GAL1Q11201 340 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 COX10Q12887 443 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 GALNTL6Q49A17 601 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 MZT2AQ6P582 158 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 NOA1Q8NC60 698 aaKnown RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 TRPC4APQ8TEL6 797 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 APOPT1Q96IL0 206 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 NSMCE2Q96MF7 247 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 FAIM2Q9BWQ8 316 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 SPRTNQ9H040 489 aaPredicted RBP12.87□□□□□ -0.35
FN1-201ENST00000323926 TSC22D4Q9Y3Q8 395 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 FAM205AQ6ZU69 1335 aa12.87□□□□□ -0.35
FN1-201ENST00000323926 NR6A1Q15406 480 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 SETMARQ53H47 684 aaPredicted RBP12.86□□□□□ -0.35
FN1-201ENST00000323926 SLC27A1Q6PCB7 646 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 C18orf25Q96B23 403 aaPredicted RBP12.86□□□□□ -0.35
FN1-201ENST00000323926 CRELD1Q96HD1 420 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 POLR1EQ9GZS1 481 aaKnown RBP12.86□□□□□ -0.35
FN1-201ENST00000323926 FAM25AB3EWG3 89 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 FAM25CB3EWG5 89 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 FAM25GB3EWG6 89 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 SEC24DO94855 1032 aaPredicted RBP12.86□□□□□ -0.35
FN1-201ENST00000323926 TMEM26Q6ZUK4 368 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 CCDC80Q76M96 950 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 FBXO39Q8N4B4 442 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 MYCBPAPQ8TBZ2 947 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
FN1-201ENST00000323926 KIAA1683Q9H0B3 1180 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 A0A087WXM4 84 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 TBKBP1A7MCY6 615 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 MTRF1O75570 445 aaKnown RBP12.86□□□□□ -0.35
FN1-201ENST00000323926 SNRPD1P62314 119 aaKnown RBP12.86□□□□□ -0.35
FN1-201ENST00000323926 HECTD3Q5T447 861 aa12.86□□□□□ -0.35
FN1-201ENST00000323926 MFSD4BQ5TF39 518 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms