RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 UCMAQ8WVF2 138 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 MYDGFQ969H8 173 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 TP53INP1Q96A56 240 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 ZHX1-C8orf76Q96EF9 292 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SSU72Q9NP77 194 aaKnown RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 IGSF9Q9P2J2 1179 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 RAPGEFL1Q9UHV5 662 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 MKL2Q9ULH7 1088 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 CHKBQ9Y259 395 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 COL11A1P12107 1806 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 A0A0G2JLW4 131 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 TSHRP16473 764 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 MUTP22033 750 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 NMT1P30419 496 aaKnown RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ATP6V1E1P36543 226 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 HSD17B4P51659 736 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 C7orf31Q8N865 590 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 DNAJC13O75165 2243 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 FAM92AA1XBS5 289 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 PIPSLA2A3N6 862 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 CLDN25C9JDP6 229 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 CCNE2O96020 404 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ADSLP30566 484 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 PRKCIP41743 596 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 BNIP2Q12982 314 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF284Q2VY69 593 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 NEK10Q6ZWH5 1172 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 PIK3C3Q8NEB9 887 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 VPS37AQ8NEZ2 397 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 DNAJC1Q96KC8 554 aaKnown RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 SNX27Q96L92 541 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF317Q96PQ6 595 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ARPC5LQ9BPX5 153 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 BRWD1Q9NSI6 2320 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 UBXN2AP68543 259 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ENPEPQ07075 957 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 EGFLAMQ63HQ2 1017 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 KIAA0408Q6ZU52 694 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 TMEM26Q6ZUK4 368 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 RBM15BQ8NDT2 890 aaKnown RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 RDM1Q8NG50 284 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 TMEM109Q9BVC6 243 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ETNK2Q9NVF9 386 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 CHORDC1Q9UHD1 332 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 CEMIPQ8WUJ3 1361 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 AKAP6Q13023 2319 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 A0A087X0B3 334 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 DHRS12A0PJE2 317 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 PCP4L1A6NKN8 68 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 LOC110117498-PIK3R3F6TDL0 507 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 TK2O00142 265 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 PRDX6P30041 224 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 CUL2Q13617 745 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ANO4Q32M45 955 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 GJB7Q6PEY0 223 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 TMEM179Q6ZVK1 233 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 SZRD1Q7Z422 152 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 MICALL2Q8IY33 904 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 TADA1Q96BN2 335 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 BIRC8Q96P09 236 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 SENP2Q9HC62 589 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 SF3B1O75533 1304 aaKnown RBP eCLIP7.2□□□□□ -1.262e-6■■■■■ 205
SMC1A-201ENST00000322213 FANCMQ8IYD8 2048 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 C5orf58C9J3I9 102 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 MAGEA10P43363 369 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 SULT2A1Q06520 285 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 QPRTQ15274 297 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 MAGEE2Q8TD90 523 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 THUMPD3Q9BV44 507 aaKnown RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF518BQ9C0D4 1074 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 NKX1-2Q9UD57 310 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 AGAP1Q9UPQ3 857 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 SVILO95425 2214 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 MAGEB16A2A368 324 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ELK3P41970 407 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 CCT8P50990 548 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 PSMC5P62195 406 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 CDC16Q13042 620 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 RUNDC3AQ59EK9 446 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 GSTCDQ8NEC7 633 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 RP9Q8TA86 221 aaKnown RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 KRCC1Q9NPI7 259 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 KRT84Q9NSB2 600 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 TRMT13Q9NUP7 481 aaKnown RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF646O15015 1829 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 A0A1W2PQ72 361 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 PGAM1P18669 254 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 SLC25A3Q00325 362 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 TNK2Q07912 1038 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ACAP2Q15057 778 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF568Q3ZCX4 644 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 FUT11Q495W5 492 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 DENND1BQ6P3S1 775 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 CYP2R1Q6VVX0 501 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 PRR23BQ6ZRT6 265 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 EFHD2Q96C19 240 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-201ENST00000322213 ITPKCQ96DU7 683 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 HPS4Q9NQG7 708 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 EFR3BQ9Y2G0 817 aa7.2□□□□□ -1.26
SMC1A-201ENST00000322213 CAPN8A6NHC0 703 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms