RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 KCTD15Q96SI1 283 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-201ENST00000321105 GPR63Q9BZJ6 419 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 TM6SF2Q9BZW4 377 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 CXCL16Q9H2A7 254 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 TMEM59LQ9UK28 342 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 VPS28Q9UK41 221 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 GABRQQ9UN88 632 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 DRG1Q9Y295 367 aaKnown RBP11.27□□□□□ -0.61
TOP3A-201ENST00000321105 PCDHB5Q9Y5E4 795 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 F5H5T6 163 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 MT-CYBP00156 380 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-201ENST00000321105 S100BP04271 92 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-201ENST00000321105 DRD4P21917 467 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 KPNA2P52292 529 aaKnown RBP11.27□□□□□ -0.61
TOP3A-201ENST00000321105 MGAT5Q09328 741 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 ZNF792Q3KQV3 632 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 PPM1JQ5JR12 505 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 LDB1Q86U70 411 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-201ENST00000321105 OR6K2Q8NGY2 324 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 RSPH1Q8WYR4 309 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 LRGUKQ96M69 825 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 STRA6Q9BX79 667 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 NOD2Q9HC29 1040 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 TPP1O14773 563 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 RAMP2O60895 175 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 METTL18O95568 372 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 RALBP11234 206 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 HADHAP40939 763 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 NOMO1Q15155 1222 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 CNGA3Q16281 694 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 FBXO48Q5FWF7 155 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 RASIP1Q5U651 963 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 GDF6Q6KF10 455 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-201ENST00000321105 KCNMB4Q86W47 210 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 FAM228AQ86W67 206 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 MFSD3Q96ES6 412 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 RP1L1Q8IWN7 2480 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-201ENST00000321105 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 USP54Q70EL1 1684 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-201ENST00000321105 TTC24A2A3L6 582 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-201ENST00000321105 MYADML2A6NDP7 307 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 ALOX15BO15296 676 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 TPST1O60507 370 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 LYPLA1O75608 230 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-201ENST00000321105 CPA3P15088 417 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 SOX4Q06945 474 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-201ENST00000321105 ZNF177Q13360 481 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-201ENST00000321105 NUP93Q8N1F7 819 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 DBF4BQ8NFT6 615 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 SEPT8Q92599 483 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 NUF2Q9BZD4 464 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 SYBUQ9NX95 663 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 MID2Q9UJV3 735 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 PCDHGC3Q9UN70 934 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 PRR23AA6NEV1 266 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 LGR5O75473 907 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 ANXA9O76027 345 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 PIGRP01833 764 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 PLD1Q13393 1074 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 BTG3Q14201 252 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-201ENST00000321105 RASA2Q15283 850 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 MSS51Q4VC12 460 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 NOMO2Q5JPE7 1267 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 ANGPTL8Q6UXH0 198 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 TRABD2AQ86V40 505 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 MTBPQ96DY7 904 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 SPDL1Q96EA4 605 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 TRIM62Q9BVG3 475 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 MYLK2Q9H1R3 596 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 FAM50BQ9Y247 325 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 F5P12259 2224 aa11.26□□□□□ -0.61
TOP3A-201ENST00000321105 DUSP11O75319 330 aaKnown RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 MMP13P45452 471 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 NAGLUP54802 743 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ACAP1Q15027 740 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 SLC25A52Q3SY17 297 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 POM121L1PQ3SYA9 428 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ZDHHC17Q8IUH5 632 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ATP6V0D2Q8N8Y2 350 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ST13P5Q8NFI4 369 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ULK4Q96C45 1275 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 MARK4Q96L34 752 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 FGD4Q96M96 766 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 CINPQ9BW66 212 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 GPAMQ9HCL2 828 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 CHRAC1Q9NRG0 131 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 SLC30A1Q9Y6M5 507 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 STX7O15400 261 aaKnown RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 CCDC22O60826 627 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 LRIG2O94898 1065 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 TOP3BO95985 862 aaKnown RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ZBTB48P10074 688 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 OR1D2P34982 312 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 GCKP35557 465 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 CD86P42081 329 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms