RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PIGZQ86VD9 579 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 RBM12BQ8IXT5 1001 aaKnown RBP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 ADGRF2Q8IZF7 708 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 DEFB106AQ8N104 65 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 STKLD1Q8NE28 680 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 DCAKDQ8WVC6 231 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 SLC4A5Q9BY07 1137 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 CCDC195A0A1B0GUA6 201 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 RBM47A0AV96 593 aaKnown RBP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 TOP3BO95985 862 aaKnown RBP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 ITGA2BP08514 1039 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 C6orf222P0C671 652 aaPredicted RBP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 IFRD2Q12894 506 aaPredicted RBP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 TMEM110Q86TL2 294 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 PDSS2Q86YH6 399 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 OR6Y1Q8NGX8 325 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 EMID1Q96A84 441 aaPredicted RBP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 MECRQ9BV79 373 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 SSU72Q9NP77 194 aaKnown RBP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 KIAA1257Q9ULG3 409 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 NRCAMQ92823 1304 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 COL1A2P08123 1366 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 MEI4A8MW99 385 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 LPXNO60711 386 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 DESP17661 470 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 TPP2P29144 1249 aaPredicted RBP15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 SULT1E1P49888 294 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 AQP4P55087 323 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 MAP3K7CLP57077 242 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 OLIG2Q13516 323 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 KYAT1Q16773 422 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 SPRYD7Q5W111 196 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 TRMT10BQ6PF06 316 aaKnown RBP15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 ACAD11Q709F0 780 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 C2orf69Q8N8R5 385 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 HASPINQ8TF76 798 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 KCTD15Q96SI1 283 aaPredicted RBP15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 TMEM165Q9HC07 324 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 PPARGC1AQ9UBK2 798 aaKnown RBP15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 UBQLN1Q9UMX0 589 aaKnown RBP15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 IPPQ9Y573 584 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 PLXNA1Q9UIW2 1896 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 RRN3P2A6NIE6 340 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 TM9SF1O15321 606 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 DHRS4L1P0CG22 281 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 YWHAZP63104 245 aaKnown RBP15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 PDE1BQ01064 536 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 BST2Q10589 180 aaKnown RBP15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 HNRNPDQ14103 355 aaKnown RBP15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 PKDCCQ504Y2 493 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 OSTM1Q86WC4 334 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 USP6NLQ92738 828 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 ADAMTS6Q9UKP5 1117 aa15.98■□□□□ 0.15
SHROOM1-201ENST00000319854 KITP10721 976 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 L1CAMP32004 1257 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 HUNKP57058 714 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 SESN2P58004 480 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 ACAP1Q15027 740 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 KLHL38Q2WGJ6 581 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 MROH9Q5TGP6 573 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 CDHR3Q6ZTQ4 885 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 HFE2Q6ZVN8 426 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 ARHGAP24Q8N264 748 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 MTBPQ96DY7 904 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 OLFM3Q96PB7 478 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 DHRS4Q9BTZ2 278 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 RHOBTB2Q9BYZ6 727 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 KLC2Q9H0B6 622 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 RRAGCQ9HB90 399 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 MARCOQ9UEW3 520 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 TRIM49D1C9J1S8 452 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 TGDSO95455 350 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 F2P00734 622 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 PSEN2P49810 448 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 TAF6P49848 677 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 LILRA4P59901 499 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 KCNJ11Q14654 390 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 ZBTB6Q15916 424 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 FAM110CQ1W6H9 321 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 TRMT5Q32P41 509 aaKnown RBP15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 SYPL2Q5VXT5 272 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 CES3Q6UWW8 571 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 ANKRD52Q8NB46 1076 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 AGAP3Q96P47 875 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 MORF4L1Q9UBU8 362 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 MLH1P40692 756 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 BCAT1P54687 386 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 TAF1CQ15572 869 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 CSPG4P5Q96PW8 444 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 KCNK16Q96T55 309 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 CCDC28BQ9BUN5 200 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 PAK5Q9P286 719 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 PCDHGB4Q9UN71 923 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 PCDHGB5Q9Y5G0 923 aa15.97■□□□□ 0.15
SHROOM1-201ENST00000319854 MYADML2A6NDP7 307 aa15.96■□□□□ 0.15
SHROOM1-201ENST00000319854 CYB561D2O14569 222 aa15.96■□□□□ 0.15
SHROOM1-201ENST00000319854 VILLO15195 856 aa15.96■□□□□ 0.15
SHROOM1-201ENST00000319854 CIB2O75838 187 aa15.96■□□□□ 0.15
SHROOM1-201ENST00000319854 PDK2Q15119 407 aa15.96■□□□□ 0.15
SHROOM1-201ENST00000319854 HEATR6Q6AI08 1181 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms