RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 N4BP2L1Q5TBK1 243 aaPredicted RBP16.46■□□□□ 0.23
CRAT-201ENST00000318080 OR6B2Q6IFH4 312 aa16.46■□□□□ 0.23
CRAT-201ENST00000318080 TRIM50Q86XT4 487 aa16.46■□□□□ 0.23
CRAT-201ENST00000318080 TUT1Q9H6E5 874 aaKnown RBP16.46■□□□□ 0.23
CRAT-201ENST00000318080 PSAT1Q9Y617 370 aa16.46■□□□□ 0.23
CRAT-201ENST00000318080 FAM159BA6NKW6 160 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 DCXO43602 365 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 ALDOAP04075 364 aaKnown RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 VARSP26640 1264 aaKnown RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 ATXN1P54253 815 aaKnown RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 GBE1Q04446 702 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 PTPN11Q06124 597 aaPredicted RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 TARBP2Q15633 366 aaKnown RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 FAM183BPQ6ZVS7 135 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 DEPDC1BQ8WUY9 529 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 MRPL4Q9BYD3 311 aaKnown RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 RBM38Q9H0Z9 239 aaKnown RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 C1orf21Q9H246 121 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 NGRNQ9NPE2 291 aaKnown RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 ASNSD1Q9NWL6 643 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 DOLKQ9UPQ8 538 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 MFHAS1Q9Y4C4 1052 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 AP4B1Q9Y6B7 739 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.22
CRAT-201ENST00000318080 C2CD4BA6NLJ0 364 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 E9PBE3 544 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 KLHL41O60662 606 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 PRKCGP05129 697 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 PRKCBP05771 671 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 SLC1A6P48664 564 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 Q3C1V9 767 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 LGSNQ5TDP6 509 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 ZPBP2Q6X784 338 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 EEPD1Q7L9B9 569 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 C12orf29Q8N999 325 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 C1orf127Q8N9H9 656 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 PIWIL2Q8TC59 973 aaKnown RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 PGBD4Q96DM1 585 aa16.45■□□□□ 0.22
CRAT-201ENST00000318080 HEXIM2Q96MH2 286 aaKnown RBP16.45■□□□□ 0.22
CRAT-201ENST00000318080 TRDMT1O14717 391 aaKnown RBP16.44■□□□□ 0.22
CRAT-201ENST00000318080 PRPSAP2O60256 369 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 GPD1P21695 349 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 IDH3AP50213 366 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 PKNOX1P55347 436 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 CCDC14Q49A88 953 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 C10orf107Q8IVU9 208 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 TRAPPC12Q8WVT3 735 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 USP13Q92995 863 aaPredicted RBP16.44■□□□□ 0.22
CRAT-201ENST00000318080 CATSPER2Q96P56 530 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 SORT1Q99523 831 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 EBNA1BP2Q99848 306 aaKnown RBP16.44■□□□□ 0.22
CRAT-201ENST00000318080 SIKE1Q9BRV8 207 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 NIFKQ9BYG3 293 aaKnown RBP16.44■□□□□ 0.22
CRAT-201ENST00000318080 KLC2Q9H0B6 622 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 WDR27A2RRH5 827 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 TPP1O14773 563 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 TCN1P20061 433 aaPredicted RBP16.44■□□□□ 0.22
CRAT-201ENST00000318080 L1CAMP32004 1257 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 AP3M2P53677 418 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 PPIDQ08752 370 aaKnown RBP16.44■□□□□ 0.22
CRAT-201ENST00000318080 LAMTOR4Q0VGL1 99 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 PDE1CQ14123 709 aaPredicted RBP16.44■□□□□ 0.22
CRAT-201ENST00000318080 ZNF667Q5HYK9 610 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 PPM1LQ5SGD2 360 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 AAGABQ6PD74 315 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 GSDMBQ8TAX9 411 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 CCDC28BQ9BUN5 200 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 PCDH18Q9HCL0 1135 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 HOXC10Q9NYD6 342 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 DNAJB4Q9UDY4 337 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 DNAH12Q6ZR08 3092 aa16.44■□□□□ 0.22
CRAT-201ENST00000318080 CXCL11O14625 94 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 AIM2O14862 343 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 CFLARO15519 480 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 MED7O43513 233 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 ITGB3P05106 788 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 PDGFRBP09619 1106 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 CYLC2Q14093 348 aaPredicted RBP16.43■□□□□ 0.22
CRAT-201ENST00000318080 TFDP2Q14188 446 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 TMEM259Q4ZIN3 620 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 KLC3Q6P597 504 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 PGM2L1Q6PCE3 622 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 FAM156AQ8NDB6 213 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 MIPOL1Q8TD10 442 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 CNPY3Q9BT09 278 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 RNPEPQ9H4A4 650 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 STX16-NPEPL1H3BU86 382 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 CCNT2O60583 730 aaKnown RBP16.43■□□□□ 0.22
CRAT-201ENST00000318080 CNMDO75829 334 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 TNNC2P02585 160 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 MAGEA3P43357 314 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 HUNKP57058 714 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 PCLAFQ15004 111 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 NRF1Q16656 503 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 CES3Q6UWW8 571 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 WDR75Q8IWA0 830 aaKnown RBP16.43■□□□□ 0.22
CRAT-201ENST00000318080 MS4A4AQ96JQ5 239 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 TEX13BQ9BXU2 312 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 BCO2Q9BYV7 579 aa16.43■□□□□ 0.22
CRAT-201ENST00000318080 INIPQ9NRY2 104 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms