RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 C2orf16Q68DN1 1984 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 F5H5T6 163 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 DCLK1O15075 740 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 SASH3O75995 380 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 PRAMEF12O95522 483 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 IVLP07476 585 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 ERCC2P18074 760 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 NCBP2-AS2Q69YL0 99 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 FBXL22Q6P050 247 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 HTR3DQ70Z44 454 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 Q7L0L9 218 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 ARID3BQ8IVW6 561 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-201ENST00000315491 PLD5Q8N7P1 536 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 PRELID2Q8N945 189 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 FGF13Q92913 245 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 HAUS1Q96CS2 278 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 CDX2Q99626 313 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-201ENST00000315491 RBM12Q9NTZ6 932 aaKnown RBP16.63■□□□□ 0.25
TUBB3-201ENST00000315491 ETNK2Q9NVF9 386 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 PPARGC1AQ9UBK2 798 aaKnown RBP16.63■□□□□ 0.25
TUBB3-201ENST00000315491 ZNF510Q9Y2H8 683 aa16.63■□□□□ 0.25
TUBB3-201ENST00000315491 R3HDM2Q9Y2K5 976 aaKnown RBP16.63■□□□□ 0.25
TUBB3-201ENST00000315491 CCDC188H7C350 402 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 APOC4-APOC2K7ER74 178 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 SCAMP3O14828 347 aaKnown RBP16.62■□□□□ 0.25
TUBB3-201ENST00000315491 FGF10O15520 208 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-201ENST00000315491 SEC31AO94979 1220 aaKnown RBP16.62■□□□□ 0.25
TUBB3-201ENST00000315491 APOC2P02655 101 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 TCF3P15923 654 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 TGM2P21980 687 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 SLC6A4P31645 630 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 MTHFRP42898 656 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 ADGRF1Q5T601 910 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 LGI2Q8N0V4 545 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 GOLGA6L1Q8N7Z2 621 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 TTC13Q8NBP0 860 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 CATSPERBQ9H7T0 1116 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 KIF9Q9HAQ2 790 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 GDE1Q9NZC3 331 aa16.62■□□□□ 0.25
TUBB3-201ENST00000315491 IGLV3-10A0A075B6K4 115 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 E2F8A0AVK6 867 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 DRGXA6NNA5 263 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 ACTN2P35609 894 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 USP4Q13107 963 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 ZNF77Q15935 545 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 CYP1B1Q16678 543 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 RFWD3Q6PCD5 774 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 NPNTQ6UXI9 565 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 RIN3Q8TB24 985 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 C1orf54Q8WWF1 131 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 IGSF8Q969P0 613 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 RPRD1AQ96P16 312 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 ZYG11BQ9C0D3 744 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 ARFGAP3Q9NP61 516 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 HOMER3Q9NSC5 361 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 GEMIN8Q9NWZ8 242 aaKnown RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 CDH7Q9ULB5 785 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 MFHAS1Q9Y4C4 1052 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 PHF2O75151 1096 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 PECAM1P16284 738 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 OTUD4Q01804 1114 aaKnown RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 PAFAH1B3Q15102 231 aaKnown RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 C5orf22Q49AR2 442 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 BBS7Q8IWZ6 715 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 FAM217AQ8IXS0 508 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 CELF5Q8N6W0 485 aaKnown RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 SMRP1Q8NCR6 262 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 ACTL9Q8TC94 416 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 ATG4AQ8WYN0 398 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 P3H4Q92791 437 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 MAGOHBQ96A72 148 aaKnown RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 MYEOVQ96EZ4 313 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 FUT8Q9BYC5 575 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 MPP6Q9NZW5 540 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 SAE1Q9UBE0 346 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 CD207Q9UJ71 328 aa16.61■□□□□ 0.25
TUBB3-201ENST00000315491 RRP15Q9Y3B9 282 aaKnown RBP16.61■□□□□ 0.25
TUBB3-201ENST00000315491 WASH4PA8MWX3 477 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 RHOQP17081 205 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 IRAK1P51617 712 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 BRD3Q15059 726 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 CCNG2Q16589 344 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 FAM78AQ5JUQ0 283 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 RABGAP1LQ5R372 815 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 KLHL7Q8IXQ5 586 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 C12orf50Q8NA57 414 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-201ENST00000315491 SMARCD2Q92925 531 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 PRICKLE1Q96MT3 831 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-201ENST00000315491 ASB16Q96NS5 453 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 GUCD1Q96NT3 240 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 FAM118BQ9BPY3 351 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 FRMD8P1Q9BZ68 369 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-201ENST00000315491 DDX47Q9H0S4 455 aaKnown RBP16.6■□□□□ 0.25
TUBB3-201ENST00000315491 LRRC19Q9H756 370 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 HEY1Q9Y5J3 304 aa16.6■□□□□ 0.25
TUBB3-201ENST00000315491 TRDMT1O14717 391 aaKnown RBP16.59■□□□□ 0.25
TUBB3-201ENST00000315491 MFSD11O43934 449 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 CNTN5O94779 1100 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms