RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PIH1D1Q9NWS0 290 aaKnown RBP18.87■□□□□ 0.61
CCDC43-201ENST00000315286 KLHL8Q9P2G9 620 aaPredicted RBP18.87■□□□□ 0.61
CCDC43-201ENST00000315286 IGSF9Q9P2J2 1179 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 NEU3Q9UQ49 428 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 SCML2Q9UQR0 700 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 PAGE1O75459 146 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 FAM155BO75949 473 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 GSTA2P09210 222 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 MLNP12872 115 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 MX2P20592 715 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 CCR1P32246 355 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 GARSP41250 739 aaKnown RBP18.86■□□□□ 0.61
CCDC43-201ENST00000315286 USP46P62068 366 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 FAAP100Q0VG06 881 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 LRRC8BQ6P9F7 803 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 CTAGE3PQ8IX95 158 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 CRIPAKQ8N1N5 446 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 CELF6Q96J87 481 aaKnown RBP18.86■□□□□ 0.61
CCDC43-201ENST00000315286 HAPLN3Q96S86 360 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 PAK6Q9NQU5 681 aaPredicted RBP18.86■□□□□ 0.61
CCDC43-201ENST00000315286 FGFR1OP2Q9NVK5 253 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.86■□□□□ 0.61
CCDC43-201ENST00000315286 NT5C1B-RDH14C9J2C7 533 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 GOLGA8RI6L899 631 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 TRIM66O15016 1216 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 FGFR3P22607 806 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 FOXN2P32314 431 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 SERPINB6P35237 376 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 PBX3P40426 434 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 ARPP19P56211 112 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 CORO7P57737 925 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 IL9RQ01113 521 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 SLC1A5Q15758 541 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 NUGGCQ68CJ6 796 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 TRMT10BQ6PF06 316 aaKnown RBP18.86■□□□□ 0.61
CCDC43-201ENST00000315286 MON1AQ86VX9 555 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 LRRC6Q86X45 466 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 GPR152Q8TDT2 470 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 TGS1Q96RS0 853 aaKnown RBP18.86■□□□□ 0.61
CCDC43-201ENST00000315286 KLF6Q99612 283 aaPredicted RBP18.86■□□□□ 0.61
CCDC43-201ENST00000315286 BRD8Q9H0E9 1235 aa18.86■□□□□ 0.61
CCDC43-201ENST00000315286 SSU72Q9NP77 194 aaKnown RBP18.86■□□□□ 0.61
CCDC43-201ENST00000315286 IQANK1A0A1B0GTG1 560 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 CRADDP78560 199 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 SPARCL1Q14515 664 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 ZNF280DQ6N043 979 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 RSPO2Q6UXX9 243 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-201ENST00000315286 SLC26A11Q86WA9 606 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 GSDMBQ8TAX9 411 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 APBB2Q92870 758 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 GORASP1Q9BQQ3 440 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 NSRP1Q9H0G5 558 aaKnown RBP18.85■□□□□ 0.61
CCDC43-201ENST00000315286 GRID1Q9ULK0 1009 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 PCDHA11Q9Y5I1 949 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 WDR27A2RRH5 827 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 SDR42E2A6NKP2 422 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 OR6C75A6NL08 312 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 MYO1CO00159 1063 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 ZBTB24O43167 697 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-201ENST00000315286 SOAT2O75908 522 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 MT-ND3P03897 115 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 TAC1P20366 129 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 GBP2P32456 591 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-201ENST00000315286 MAGEA11P43364 429 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 ATN1P54259 1190 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-201ENST00000315286 CCL23P55773 120 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 SESN2P58004 480 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-201ENST00000315286 ZBTB17Q13105 803 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 PPP2R5DQ14738 602 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 ARTNQ5T4W7 220 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 FUT10Q6P4F1 479 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 TMEM173Q86WV6 379 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-201ENST00000315286 NPAS4Q8IUM7 802 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 CCDC197Q8NCU1 140 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 STAMBPL1Q96FJ0 436 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 FCRL2Q96LA5 508 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-201ENST00000315286 FBXO44Q9H4M3 255 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 SAGE1Q9NXZ1 904 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 SAMD15Q9P1V8 674 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 SLC27A5Q9Y2P5 690 aa18.85■□□□□ 0.61
CCDC43-201ENST00000315286 PLXNA3P51805 1871 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 ATXN2Q99700 1313 aaKnown RBP18.84■□□□□ 0.61
CCDC43-201ENST00000315286 TBKBP1A7MCY6 615 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 UGT1A9O60656 530 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 ZNF189O75820 626 aaPredicted RBP18.84■□□□□ 0.61
CCDC43-201ENST00000315286 GALTP07902 379 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 MGAT1P26572 445 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 CD68P34810 354 aaPredicted RBP18.84■□□□□ 0.61
CCDC43-201ENST00000315286 CASC4Q6P4E1 433 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 BANPQ8N9N5 519 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 ARNTL2Q8WYA1 636 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 SERAC1Q96JX3 654 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 AGAP3Q96P47 875 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 UGT1A7Q9HAW7 530 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 UGT1A10Q9HAW8 530 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 UGT1A8Q9HAW9 530 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 GMIPQ9P107 970 aa18.84■□□□□ 0.61
CCDC43-201ENST00000315286 KCNU1A8MYU2 1149 aa18.83■□□□□ 0.61
CCDC43-201ENST00000315286 MTSS1O43312 755 aa18.83■□□□□ 0.61
CCDC43-201ENST00000315286 KIAA0754O94854 1291 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms