RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 ELMO3Q96BJ8 720 aa12.22□□□□□ -0.45
AMBRA1-201ENST00000314845 ACO2Q99798 780 aaKnown RBP12.22□□□□□ -0.45
AMBRA1-201ENST00000314845 VTI1BQ9UEU0 232 aa12.22□□□□□ -0.45
AMBRA1-201ENST00000314845 TAGLN3Q9UI15 199 aa12.22□□□□□ -0.45
AMBRA1-201ENST00000314845 ZNF229Q9UJW7 825 aa12.22□□□□□ -0.45
AMBRA1-201ENST00000314845 E9PBE3 544 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 NR5A2O00482 541 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 KLHL41O60662 606 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 NFICP08651 508 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 CSH1P0DML2 217 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 CSH2P0DML3 217 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 ZNF23P17027 643 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 ITGB5P18084 799 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 POLR2EP19388 210 aaKnown RBP12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 PPP2R1BP30154 601 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 MAPK8P45983 427 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 RPL21P46778 160 aaKnown RBP12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 CRYBB1P53674 252 aaPredicted RBP12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 RASA2Q15283 850 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 FAM120BQ96EK7 910 aaKnown RBP12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 HSD17B14Q9BPX1 270 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 TCF7L2Q9NQB0 619 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 ANKRD6Q9Y2G4 727 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 BMP10O95393 424 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 ACADSP16219 412 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 RBL1P28749 1068 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 CDK7P50613 346 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 CASP5P51878 434 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 BOP1Q14137 746 aaKnown RBP12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 PGS1Q32NB8 556 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 AGKQ53H12 422 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 TTC33Q6PID6 262 aaPredicted RBP12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 SCUBE1Q8IWY4 988 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 KAT5Q92993 513 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 PHF21BQ96EK2 531 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 DPY30Q9C005 99 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.21□□□□□ -0.452e-6■□□□□ 10.1
AMBRA1-201ENST00000314845 DNAJC18Q9H819 358 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 PADI4Q9UM07 663 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 PCDHGC5Q9Y5F6 944 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 FGFR1P11362 822 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 CHKAP35790 457 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 ZNF143P52747 638 aaPredicted RBP12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 CHMP1BQ7LBR1 199 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 LRRC49Q8IUZ0 686 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 ANKRD52Q8NB46 1076 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 VPS33AQ96AX1 596 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 TSPAN18Q96SJ8 248 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 TMEM120AQ9BXJ8 343 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 SLC40A1Q9NP59 571 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 KLHL28Q9NXS3 571 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 STARD13Q9Y3M8 1113 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 RIC1Q4ADV7 1423 aa12.21□□□□□ -0.45
AMBRA1-201ENST00000314845 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 H3BMM5 538 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 PSMD12O00232 456 aaPredicted RBP12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 CPSF4O95639 269 aaKnown RBP12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 SSTR1P30872 391 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 MRPS35P82673 323 aaKnown RBP12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 SLC45A4Q5BKX6 768 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 PRAMEF19Q5SWL8 479 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 CES5AQ6NT32 575 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 LRRC55Q6ZSA7 311 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 PIGZQ86VD9 579 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 OR56A4Q8NGH8 313 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 RIN3Q8TB24 985 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 SHC3Q92529 594 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 KLRG1Q96E93 195 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 HAO1Q9UJM8 370 aa12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.21□□□□□ -0.46
AMBRA1-201ENST00000314845 SPTLC1O15269 473 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 DAB1O75553 588 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 STAU1O95793 577 aaKnown RBP12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 ADRB2P07550 413 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 SLC2A4P14672 509 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 ACOX1Q15067 660 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 ZACNQ401N2 412 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 USP45Q70EL2 814 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 TMC3Q7Z5M5 1100 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 FAM71AQ8IYT1 594 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 LRRC52Q8N7C0 313 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 APOPT1Q96IL0 206 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 SERAC1Q96JX3 654 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 TMEM245Q9H330 911 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 HPS4Q9NQG7 708 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 PTCH2Q9Y6C5 1203 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 LYPLA2O95372 231 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 ITGB6P18564 788 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 SERPINH1P50454 418 aaKnown RBP12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 SLC16A1P53985 500 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 NME5P56597 212 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 DPYSL3Q14195 570 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 FNDC3BQ53EP0 1204 aaKnown RBP12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 ZSWIM2Q8NEG5 633 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 ETNPPLQ8TBG4 499 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 ASB2Q96Q27 587 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 THAP1Q9NVV9 213 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 DNMT3LQ9UJW3 386 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 GIT1Q9Y2X7 761 aa12.2□□□□□ -0.46
AMBRA1-201ENST00000314845 HES2Q9Y543 173 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms