RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SLC6A3Q01959 620 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 OGFRL1Q5TC84 451 aaPredicted RBP13.79□□□□□ -0.2
SKA3-202ENST00000314759 METTL7BQ6UX53 244 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 B3GNT6Q6ZMB0 384 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 RBM12BQ8IXT5 1001 aaKnown RBP13.79□□□□□ -0.2
SKA3-202ENST00000314759 ZFP28Q8NHY6 868 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 GRIP2Q9C0E4 1043 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 DTLQ9NZJ0 730 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 E9PBE3 544 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 GAS2O43903 313 aaKnown RBP13.79□□□□□ -0.2
SKA3-202ENST00000314759 KLHL41O60662 606 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 P4HA1P13674 534 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 PMLP29590 882 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 TYK2P29597 1187 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 RPL26P61254 145 aaKnown RBP13.79□□□□□ -0.2
SKA3-202ENST00000314759 SNAPC2Q13487 334 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 DPYSL2Q16555 572 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 INSCQ1MX18 579 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 HSDL1Q3SXM5 330 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 PPP1R26Q5T8A7 1209 aaPredicted RBP13.79□□□□□ -0.2
SKA3-202ENST00000314759 TNS4Q8IZW8 715 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 EPB41L1Q9H4G0 881 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 HOXC10Q9NYD6 342 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 MORF4L1Q9UBU8 362 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 LZTS1Q9Y250 596 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 ZNF487B1APH4 448 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 PAPSS1O43252 624 aaPredicted RBP13.78□□□□□ -0.2
SKA3-202ENST00000314759 CLPTM1O96005 669 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 CDK4P11802 303 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 MLNP12872 115 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 CPA3P15088 417 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 FDFT1P37268 417 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 RPL5P46777 297 aaKnown RBP13.78□□□□□ -0.2
SKA3-202ENST00000314759 ALDH1A3P47895 512 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 NR2C2P49116 596 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 KLF10Q13118 480 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 MYLK3Q32MK0 819 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 SLC9B1Q4ZJI4 515 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 PRAMEF18Q5VWM3 479 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 BSPRYQ5W0U4 402 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 EPGNQ6UW88 154 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 TTC30AQ86WT1 665 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 ZNF781Q8N8C0 355 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 HTR3CQ8WXA8 447 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 LGMNQ99538 433 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 NT5C1AQ9BXI3 368 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 ERVK-10P10266 1014 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 CLCN3P51790 818 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 SLC10A6Q3KNW5 377 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 PKDCCQ504Y2 493 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 LRRC8BQ6P9F7 803 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 CES3Q6UWW8 571 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 NAPRTQ6XQN6 538 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 CMC1Q7Z7K0 106 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 MAPK15Q8TD08 544 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 LENG8Q96PV6 779 aaPredicted RBP13.78□□□□□ -0.2
SKA3-202ENST00000314759 CSPG4P5Q96PW8 444 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 RTKNQ9BST9 563 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 SLC4A5Q9BY07 1137 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 ZNF510Q9Y2H8 683 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 DTNAQ9Y4J8 743 aa13.78□□□□□ -0.2
SKA3-202ENST00000314759 A0A0A0MRY4 1105 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 MAGEB3O15480 346 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 DNAJA2O60884 412 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 FAM163BP0C2L3 166 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 PGAM1P18669 254 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 TPP2P29144 1249 aaPredicted RBP13.77□□□□□ -0.2
SKA3-202ENST00000314759 PRDX6P30041 224 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 NCBP2-AS2Q69YL0 99 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 DUS1LQ6P1R4 473 aaKnown RBP13.77□□□□□ -0.2
SKA3-202ENST00000314759 SAMD7Q7Z3H4 446 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 TMEM110Q86TL2 294 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 PLD6Q8N2A8 252 aaKnown RBP13.77□□□□□ -0.2
SKA3-202ENST00000314759 PQLC1Q8N2U9 271 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 COLGALT1Q8NBJ5 622 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 NETO2Q8NC67 525 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 PIP4K2CQ8TBX8 421 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 ABTB1Q969K4 478 aaPredicted RBP13.77□□□□□ -0.2
SKA3-202ENST00000314759 SPATA13Q96N96 652 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 PGLYRP2Q96PD5 576 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 KCTD15Q96SI1 283 aaPredicted RBP13.77□□□□□ -0.2
SKA3-202ENST00000314759 KCNK16Q96T55 309 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 HACL1Q9UJ83 578 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 ZNF112Q9UJU3 913 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 APPL1Q9UKG1 709 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 KIAA1257Q9ULG3 409 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 PCDHB12Q9Y5F1 795 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 TRIP11Q15643 1979 aa13.77□□□□□ -0.2
SKA3-202ENST00000314759 SOWAHBA6NEL2 793 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 C19orf81C9J6K1 198 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 TOMM70O94826 608 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 FBXO21O94952 628 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 ARIH2O95376 493 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 ZFXP17010 805 aaPredicted RBP13.77□□□□□ -0.21
SKA3-202ENST00000314759 EDNRBP24530 442 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 ACAT1P24752 427 aaKnown RBP13.77□□□□□ -0.21
SKA3-202ENST00000314759 GALK1P51570 392 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 FSCBQ5H9T9 825 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 IYDQ6PHW0 289 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms