RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ZNF865P0CJ78 1059 aaPredicted RBP14.01□□□□□ -0.17
DDX54-202ENST00000314045 MMP13P45452 471 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 NPY2RP49146 381 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 HDAC4P56524 1084 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 SMAD3P84022 425 aaKnown RBP14.01□□□□□ -0.17
DDX54-202ENST00000314045 HSP90AA5PQ58FG0 334 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 SERPINI1Q99574 410 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 CORO1BQ9BR76 489 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 ZYG11BQ9C0D3 744 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 SEPT3Q9UH03 358 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 PTPRJQ12913 1337 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 TLL1O43897 1013 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 GLRA3O75311 464 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 LAG3P18627 525 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 NDUFV1P49821 464 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 SLC5A3P53794 718 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 IFI35P80217 286 aaPredicted RBP14.01□□□□□ -0.17
DDX54-202ENST00000314045 BRMS1LQ5PSV4 323 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 LRRC39Q96DD0 335 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 SEC16BQ96JE7 1060 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 PPP1R36Q96LQ0 422 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 SLC4A7Q9Y6M7 1214 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 CFHP08603 1231 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 SLC8A1P32418 973 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 GTF2A1P52655 376 aaPredicted RBP14.01□□□□□ -0.17
DDX54-202ENST00000314045 PTAR1Q7Z6K3 402 aaPredicted RBP14.01□□□□□ -0.17
DDX54-202ENST00000314045 LRRC34Q8IZ02 419 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 PGBD3Q8N328 593 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 EML4Q9HC35 981 aaKnown RBP14.01□□□□□ -0.17
DDX54-202ENST00000314045 CYLDQ9NQC7 956 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 PLA2G4CQ9UP65 541 aa14.01□□□□□ -0.17
DDX54-202ENST00000314045 A0A1W2PQH9 124 aa14□□□□□ -0.17
DDX54-202ENST00000314045 C2CD4BA6NLJ0 364 aa14□□□□□ -0.17
DDX54-202ENST00000314045 MAP2K7O14733 419 aa14□□□□□ -0.17
DDX54-202ENST00000314045 MSI1O43347 362 aaKnown RBP14□□□□□ -0.17
DDX54-202ENST00000314045 PYGBP11216 843 aa14□□□□□ -0.17
DDX54-202ENST00000314045 STMN1P16949 149 aa14□□□□□ -0.17
DDX54-202ENST00000314045 TYMPP19971 482 aa14□□□□□ -0.17
DDX54-202ENST00000314045 TNFRSF8P28908 595 aa14□□□□□ -0.17
DDX54-202ENST00000314045 NAA25Q14CX7 972 aa14□□□□□ -0.17
DDX54-202ENST00000314045 TPGS1Q6ZTW0 290 aa14□□□□□ -0.17
DDX54-202ENST00000314045 PSTKQ8IV42 348 aaKnown RBP14□□□□□ -0.17
DDX54-202ENST00000314045 DENND1CQ8IV53 801 aa14□□□□□ -0.17
DDX54-202ENST00000314045 LPCAT1Q8NF37 534 aa14□□□□□ -0.17
DDX54-202ENST00000314045 DQX1Q8TE96 717 aaKnown RBP14□□□□□ -0.17
DDX54-202ENST00000314045 FAM136AQ96C01 138 aa14□□□□□ -0.17
DDX54-202ENST00000314045 PWWP2AQ96N64 755 aa14□□□□□ -0.17
DDX54-202ENST00000314045 CSPG4P5Q96PW8 444 aa14□□□□□ -0.17
DDX54-202ENST00000314045 FAM167BQ9BTA0 163 aa14□□□□□ -0.17
DDX54-202ENST00000314045 ERI2A8K979 691 aaKnown RBP14□□□□□ -0.17
DDX54-202ENST00000314045 SYN3O14994 580 aa14□□□□□ -0.17
DDX54-202ENST00000314045 CHADO15335 359 aa14□□□□□ -0.17
DDX54-202ENST00000314045 VAPBO95292 243 aa14□□□□□ -0.17
DDX54-202ENST00000314045 KCNE1P15382 129 aa14□□□□□ -0.17
DDX54-202ENST00000314045 CDKN2BP42772 138 aa14□□□□□ -0.17
DDX54-202ENST00000314045 PTPN9P43378 593 aa14□□□□□ -0.17
DDX54-202ENST00000314045 LMO3Q8TAP4 145 aa14□□□□□ -0.17
DDX54-202ENST00000314045 PPWD1Q96BP3 646 aaKnown RBP14□□□□□ -0.17
DDX54-202ENST00000314045 ASAH2Q9NR71 780 aa14□□□□□ -0.17
DDX54-202ENST00000314045 RNF186Q9NXI6 227 aa14□□□□□ -0.17
DDX54-202ENST00000314045 CNTN3Q9P232 1028 aa14□□□□□ -0.17
DDX54-202ENST00000314045 PAGE1O75459 146 aa14□□□□□ -0.17
DDX54-202ENST00000314045 ATXN8OSP0DMR3 200 aa14□□□□□ -0.17
DDX54-202ENST00000314045 GP5P40197 560 aa14□□□□□ -0.17
DDX54-202ENST00000314045 PTP4A2Q12974 167 aa14□□□□□ -0.17
DDX54-202ENST00000314045 GTF2H3Q13889 308 aa14□□□□□ -0.17
DDX54-202ENST00000314045 ARID3BQ8IVW6 561 aaPredicted RBP14□□□□□ -0.17
DDX54-202ENST00000314045 MFN1Q8IWA4 741 aa14□□□□□ -0.17
DDX54-202ENST00000314045 CRYBG2Q8N1P7 616 aa14□□□□□ -0.17
DDX54-202ENST00000314045 SH3KBP1Q96B97 665 aa14□□□□□ -0.17
DDX54-202ENST00000314045 CACYBPQ9HB71 228 aaKnown RBP14□□□□□ -0.17
DDX54-202ENST00000314045 PDLIM7Q9NR12 457 aa14□□□□□ -0.17
DDX54-202ENST00000314045 ZNF446Q9NWS9 450 aa14□□□□□ -0.17
DDX54-202ENST00000314045 ACOT9Q9Y305 439 aa14□□□□□ -0.17
DDX54-202ENST00000314045 SRP72O76094 671 aaKnown RBP13.99□□□□□ -0.17
DDX54-202ENST00000314045 SPATA31D3P0C874 917 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 CCNB1P14635 433 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 CNTFP26441 200 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 SERPINB8P50452 374 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 GBE1Q04446 702 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 SDE2Q6IQ49 451 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 SPATA31D4Q6ZUB0 917 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 HIPK4Q8NE63 616 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 MPP6Q9NZW5 540 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 GMIPQ9P107 970 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.99□□□□□ -0.17
DDX54-202ENST00000314045 ZNF197O14709 1029 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 MEFVO15553 781 aaPredicted RBP13.99□□□□□ -0.17
DDX54-202ENST00000314045 GLP2RO95838 553 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 NFKB1P19838 968 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 AARS2Q5JTZ9 985 aaKnown RBP13.99□□□□□ -0.17
DDX54-202ENST00000314045 TMTC4Q5T4D3 741 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 AGAP9Q5VTM2 703 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 CPNE8Q86YQ8 564 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 HS6ST3Q8IZP7 471 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 OR52K1Q8NGK4 314 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 PRKD2Q9BZL6 878 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 POLR1EQ9GZS1 481 aaKnown RBP13.99□□□□□ -0.17
DDX54-202ENST00000314045 DCDC2Q9UHG0 476 aa13.99□□□□□ -0.17
DDX54-202ENST00000314045 TRMT6Q9UJA5 497 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms