RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ZNF606Q8WXB4 792 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 ATP2A3Q93084 1043 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 PNPLA8Q9NP80 782 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 MKS1Q9NXB0 559 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 LTBP3Q9NS15 1303 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 SEPT6Q14141 434 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 SLC9B1Q4ZJI4 515 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 ADAM32Q8TC27 787 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 ATP6V1E2Q96A05 226 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 SNX27Q96L92 541 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 DHX33Q9H6R0 707 aaKnown RBP18.49■□□□□ 0.55
SPSB4-201ENST00000310546 KIAA1522Q9P206 1035 aaPredicted RBP18.49■□□□□ 0.55
SPSB4-201ENST00000310546 EMCNQ9ULC0 261 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 A0A1W2PPW3 197 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 ZNF195O14628 629 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 PRKCHP24723 683 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 GMPRP36959 345 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 CUL2Q13617 745 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 IL23RQ5VWK5 629 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 TMEM214Q6NUQ4 689 aaKnown RBP18.48■□□□□ 0.55
SPSB4-201ENST00000310546 C16orf89Q6UX73 402 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 UNC5AQ6ZN44 842 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 TMEM102Q8N9M5 508 aaPredicted RBP18.48■□□□□ 0.55
SPSB4-201ENST00000310546 LRRN4Q8WUT4 740 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 SLC4A5Q9BY07 1137 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 SLC17A6Q9P2U8 582 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 BCAP29Q9UHQ4 241 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 PRPF19Q9UMS4 504 aaKnown RBP18.48■□□□□ 0.55
SPSB4-201ENST00000310546 PRSS51A0A1B0GVH4 220 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 NEMP1O14524 444 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 ZC3H11AO75152 810 aaKnown RBP eCLIP18.48■□□□□ 0.55
SPSB4-201ENST00000310546 MAP3K6O95382 1288 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 PAX3P23760 479 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 KDELR1P24390 212 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 ROR1Q01973 937 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 SLC10A2Q12908 348 aaPredicted RBP18.48■□□□□ 0.55
SPSB4-201ENST00000310546 PCLAFQ15004 111 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 TAF5Q15542 800 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 EGFLAMQ63HQ2 1017 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 SLC39A4Q6P5W5 647 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 FAM47BQ8NA70 645 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 CHURC1Q8WUH1 139 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 RPAP3Q9H6T3 665 aaPredicted RBP18.48■□□□□ 0.55
SPSB4-201ENST00000310546 CLK4Q9HAZ1 481 aaKnown RBP18.48■□□□□ 0.55
SPSB4-201ENST00000310546 VPS45Q9NRW7 570 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 PNPLA3Q9NST1 481 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 NR2E3Q9Y5X4 410 aa18.48■□□□□ 0.55
SPSB4-201ENST00000310546 H7C0C1 242 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 PLOD2O00469 737 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 AMHP03971 560 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 RFC1P35251 1148 aaPredicted RBP18.47■□□□□ 0.55
SPSB4-201ENST00000310546 ATP5OP48047 213 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 SOX10P56693 466 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 BNIP3Q12983 259 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 CYP2A13Q16696 494 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 PIGGQ5H8A4 983 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 FGD3Q5JSP0 725 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 THOC7Q6I9Y2 204 aaKnown RBP18.47■□□□□ 0.55
SPSB4-201ENST00000310546 SCAIQ8N9R8 606 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 TMEM161BQ8NDZ6 487 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 APOBEC3GQ9HC16 384 aaKnown RBP18.47■□□□□ 0.55
SPSB4-201ENST00000310546 SUN2Q9UH99 717 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 SBF1O95248 1867 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 MYCLP12524 364 aaPredicted RBP18.47■□□□□ 0.55
SPSB4-201ENST00000310546 CCDC130P13994 396 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 CD247P20963 164 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 NPTX2P47972 431 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 SNRPFP62306 86 aaKnown RBP18.47■□□□□ 0.55
SPSB4-201ENST00000310546 TXNL4AP83876 142 aaKnown RBP18.47■□□□□ 0.55
SPSB4-201ENST00000310546 TDRD10Q5VZ19 366 aaKnown RBP18.47■□□□□ 0.55
SPSB4-201ENST00000310546 RWDD4Q6NW29 188 aaKnown RBP18.47■□□□□ 0.55
SPSB4-201ENST00000310546 RCN3Q96D15 328 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 ATG4CQ96DT6 458 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 OR52B2Q96RD2 323 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 EIF2AQ9BY44 585 aaKnown RBP18.47■□□□□ 0.55
SPSB4-201ENST00000310546 TRPV6Q9H1D0 765 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 HIPK3Q9H422 1215 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 COL20A1Q9P218 1284 aa18.47■□□□□ 0.55
SPSB4-201ENST00000310546 TRDMT1O14717 391 aaKnown RBP18.46■□□□□ 0.55
SPSB4-201ENST00000310546 CALB1P05937 261 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 YWHABP31946 246 aaKnown RBP18.46■□□□□ 0.55
SPSB4-201ENST00000310546 RAB15P59190 212 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 ABCE1P61221 599 aaKnown RBP18.46■□□□□ 0.55
SPSB4-201ENST00000310546 GPR107Q5VW38 600 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 CARM1Q86X55 608 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 UNC5BQ8IZJ1 945 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 GPD1LQ8N335 351 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 ZNF781Q8N8C0 355 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 CIB1Q99828 191 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 FAM96AQ9H5X1 160 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 ZNF408Q9H9D4 720 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 POLR2AP24928 1970 aaKnown RBP18.46■□□□□ 0.55
SPSB4-201ENST00000310546 APOC4-APOC2K7ER74 178 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 NDUFB5O43674 189 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 PLIN3O60664 434 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 LRCH4O75427 683 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 STAM2O75886 525 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 APOC2P02655 101 aa18.46■□□□□ 0.55
SPSB4-201ENST00000310546 RALBP11234 206 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms