RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 PSMD11O00231 422 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 FOXN1O15353 648 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 MSH3P20585 1137 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 FEN1P39748 380 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 ZNF284Q2VY69 593 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 OR6Y1Q8NGX8 325 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 ZNF221Q9UK13 617 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 NRKQ7Z2Y5 1582 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 UMODL1Q5DID0 1318 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 NUDT14O95848 222 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 PCNAP12004 261 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 ALOX12P18054 663 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 BNIP1Q12981 228 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 EMC2Q15006 297 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 CLEC16AQ2KHT3 1053 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 CELF4Q9BZC1 486 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 PRKD2Q9BZL6 878 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 GOLPH3Q9H4A6 298 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 DMGDHQ9UI17 866 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 VAV3Q9UKW4 847 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 NEU2Q9Y3R4 380 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 IFRD1O00458 451 aaPredicted RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 SOAT2O75908 522 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 EPN2O95208 641 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 GSTM1P09488 218 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 FASP25445 335 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 ZNF557Q8N988 423 aaPredicted RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 DAGLBQ8NCG7 672 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 CYP7B1O75881 506 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 BNIP2Q12982 314 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 EGFLAMQ63HQ2 1017 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 PACS1Q6VY07 963 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 LDHDQ86WU2 507 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 HERC6Q8IVU3 1022 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 CIPCQ9C0C6 399 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 MARCH7Q9H992 704 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 PNPLA3Q9NST1 481 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 BARHL2Q9NY43 387 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 DYRK1BQ9Y463 629 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 GNG14A0A1W2PPG7 69 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 LRRC14BA6NHZ5 514 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 TRDMT1O14717 391 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 NR2C2P49116 596 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 DDX39BQ13838 428 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 GNA13Q14344 377 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 DRAP1Q14919 205 aaPredicted RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 PTPAQ15257 358 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 TAF13Q15543 124 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 QRICH1Q2TAL8 776 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 CYP4V2Q6ZWL3 525 aaPredicted RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 PCSK9Q8NBP7 692 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 CHP1Q99653 195 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 TMEM47Q9BQJ4 181 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 FOXN3O00409 490 aaPredicted RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 POLRMTO00411 1230 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 PEX14O75381 377 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 IFI30P13284 250 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 NCAM1P13591 858 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 TNNI3P19429 210 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 CHKAP35790 457 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 FXR1P51114 621 aaKnown RBP eCLIP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 CEP68Q76N32 757 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 RGL4Q8IZJ4 473 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 FAXDC2Q96IV6 333 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 EPB41L4AQ9HCS5 686 aaPredicted RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 EXOSC4Q9NPD3 245 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 TRMT6Q9UJA5 497 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 SLC12A4Q9UP95 1085 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 STON1Q9Y6Q2 735 aa8.5□□□□□ -1.05
PPARGC1B-201ENST00000309241 METTL21EPA6NDL7 271 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 FAM153BP0C7A2 387 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 ERCC2P18074 760 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 FAM153CQ494X1 144 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 SUSD4Q5VX71 490 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 MTSS1LQ765P7 747 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 SLC20A1Q8WUM9 679 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 INTS2Q9H0H0 1204 aaKnown RBP8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 VPS28Q9UK41 221 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 C2orf81A6NN90 581 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 NOS1APO75052 506 aaPredicted RBP8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 UNC5CO95185 931 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 FTLP02792 175 aaPredicted RBP8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 RASA1P20936 1047 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 TMEM126BQ8IUX1 230 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 ADI1Q9BV57 179 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 ACAT2Q9BWD1 397 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 PRDM8Q9NQV8 689 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 SH3BP4Q9P0V3 963 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 CROTQ9UKG9 612 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 ZNF862O60290 1169 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 CYP11B2P19099 503 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 RASA2Q15283 850 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 MROH9Q5TGP6 573 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 KCTD4Q8WVF5 259 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 RORBQ92753 470 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 NT5C1AQ9BXI3 368 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 ZNF304Q9HCX3 659 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 THAP1Q9NVV9 213 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 ING3Q9NXR8 418 aa8.49□□□□□ -1.05
PPARGC1B-201ENST00000309241 TFR2Q9UP52 801 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms