RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 KIF9Q9HAQ2 790 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 MYO18AQ92614 2054 aaKnown RBP23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 H7C4K7 107 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 CSF2RAP15509 400 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 PHBP35232 272 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 DEFB103AP81534 67 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 WASHC5Q12768 1159 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 SF3A3Q12874 501 aaKnown RBP eCLIP23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 TAF10Q12962 218 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 COLGALT1Q8NBJ5 622 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 CABS1Q96KC9 395 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 WDR27A2RRH5 827 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 KRT15P19012 456 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 GLUD2P49448 558 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 EFEMP1Q12805 493 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 SPPL2BQ8TCT7 592 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 FBF1Q8TES7 1133 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 FCRL2Q96LA5 508 aaPredicted RBP23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 SLC24A2Q9UI40 661 aa23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 MAGED2Q9UNF1 606 aaPredicted RBP23.09■■□□□ 1.29
PDLIM2-202ENST00000308354 OR1D2P34982 312 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 GEMIN4P57678 1058 aaKnown RBP23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 NR1H3Q13133 447 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 BRMS1LQ5PSV4 323 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 RASIP1Q5U651 963 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 ZNF567Q8N184 647 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 IGSF21Q96ID5 467 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 OSBPL2Q9H1P3 480 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 PSMC3IPQ9P2W1 217 aaPredicted RBP23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 NEU3Q9UQ49 428 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 TEX264Q9Y6I9 313 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 NUP205Q92621 2012 aa23.08■■□□□ 1.29
PDLIM2-202ENST00000308354 SPAG7O75391 227 aa23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 HAPLN1P10915 354 aaPredicted RBP23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 USP41Q3LFD5 358 aa23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 RNF187Q5TA31 235 aaPredicted RBP23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 PPP1R21Q6ZMI0 780 aa23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 PDZD4Q76G19 769 aaPredicted RBP23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 YTHDF3Q7Z739 585 aaKnown RBP23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 MIB1Q86YT6 1006 aa23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 OTUD6BQ8N6M0 293 aa23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 TRABDQ9H4I3 376 aa23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 ACSS3Q9H6R3 686 aa23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 PIH1D1Q9NWS0 290 aaKnown RBP23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 NKIRAS1Q9NYS0 192 aa23.08■■□□□ 1.28
PDLIM2-202ENST00000308354 TRIM43BA6NCK2 446 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 TCP11X1B4DZS4 312 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 ACRP10323 421 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 GJA8P48165 433 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 PSMD5Q16401 504 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 KIAA1841Q6NSI8 718 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 ZNF534Q76KX8 674 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 TOP1MTQ969P6 601 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 TRIM43Q96BQ3 446 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 SERPINB11Q96P15 392 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 TRIM56Q9BRZ2 755 aaKnown RBP23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 C11orf49Q9H6J7 331 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 PPCSQ9HAB8 311 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 IL37Q9NZH6 218 aa23.07■■□□□ 1.28
PDLIM2-202ENST00000308354 STK10O94804 968 aaKnown RBP23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 ATF6P18850 670 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 PSMB4P28070 264 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 MAGEA6P43360 314 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 FBXO46Q6PJ61 603 aaPredicted RBP23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 C4orf22Q6V702 233 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 C4orf33Q8N1A6 199 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 PDCD7Q8N8D1 485 aaKnown RBP23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 CKAP2Q8WWK9 683 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 CFAP36Q96G28 342 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 HAPLN3Q96S86 360 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 PAFAH2Q99487 392 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 FAM47DPA6NHR8 397 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 KCNU1A8MYU2 1149 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 LIG3P49916 1009 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 SEMA5AQ13591 1074 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 PPP2R5DQ14738 602 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 PID1Q7Z2X4 250 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 PIGWQ7Z7B1 504 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 C14orf80Q86SX3 495 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 ELAC2Q9BQ52 826 aaKnown RBP23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 NDFIP2Q9NV92 336 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 HS3ST4Q9Y661 456 aa23.06■■□□□ 1.28
PDLIM2-202ENST00000308354 FAM92AA1XBS5 289 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 EFEMP2O95967 443 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 STX2P32856 288 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 RASA2Q15283 850 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 FAM43BQ6ZT52 329 aaPredicted RBP23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 FGFR1OP2Q9NVK5 253 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 MPP6Q9NZW5 540 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 A0A1W2PPM1 405 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 OPHN1O60890 802 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 HMBSP08397 361 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 PTPN3P26045 913 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 GARSP41250 739 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 MAGEA9P43362 315 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 PPIDQ08752 370 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 KLHL38Q2WGJ6 581 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 ARTNQ5T4W7 220 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 ARHGAP36Q6ZRI8 547 aa23.05■■□□□ 1.28
PDLIM2-202ENST00000308354 ARHGAP18Q8N392 663 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms