RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RPL9P32969 192 aaKnown RBP13.66□□□□□ -0.22
TRIM56-201ENST00000306085 NLGN1Q8N2Q7 840 aa13.66□□□□□ -0.22
TRIM56-201ENST00000306085 ZNF276Q8N554 614 aa13.66□□□□□ -0.22
TRIM56-201ENST00000306085 PYDC1Q8WXC3 89 aa13.66□□□□□ -0.22
TRIM56-201ENST00000306085 PCDH12Q9NPG4 1184 aa13.66□□□□□ -0.22
TRIM56-201ENST00000306085 L1RE1Q9UN81 338 aa13.66□□□□□ -0.22
TRIM56-201ENST00000306085 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
TRIM56-201ENST00000306085 SLC2A3P11169 496 aa13.66□□□□□ -0.22
TRIM56-201ENST00000306085 ZFP69Q49AA0 526 aa13.66□□□□□ -0.22
TRIM56-201ENST00000306085 PPP1R18Q6NYC8 613 aa13.66□□□□□ -0.22
TRIM56-201ENST00000306085 GUF1Q8N442 669 aaKnown RBP13.66□□□□□ -0.22
TRIM56-201ENST00000306085 A0A0G2JPF8 293 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 HNRNPCL3B7ZW38 293 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 HNRNPCL4P0DMR1 293 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 CDC25CP30307 473 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 POLD2P49005 469 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ADHFE1Q8IWW8 467 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 TRPV1Q8NER1 839 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 GRIP1Q9Y3R0 1128 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 C2orf71A6NGG8 1288 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ITGA4P13612 1032 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 FAUP35544 74 aaKnown RBP13.65□□□□□ -0.22
TRIM56-201ENST00000306085 KDM7AQ6ZMT4 941 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ATP6V0D2Q8N8Y2 350 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 IKZF3Q9UKT9 509 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 MAGEB3O15480 346 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 CRATP43155 626 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 IL18Q14116 193 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 POU5F2Q8N7G0 328 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 USP38Q8NB14 1042 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 CST11Q9H112 138 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 AP4E1Q9UPM8 1137 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ERGIC3Q9Y282 383 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ARHGEF33A8MVX0 844 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 NR3C2P08235 984 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 KLK7P49862 253 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 TCEA2Q15560 299 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 NAB2Q15742 525 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ATL1Q8WXF7 558 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 HTRA1Q92743 480 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ZNF512BQ96KM6 892 aaPredicted RBP13.65□□□□□ -0.22
TRIM56-201ENST00000306085 APOL2Q9BQE5 337 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 GPN1Q9HCN4 374 aaPredicted RBP13.65□□□□□ -0.22
TRIM56-201ENST00000306085 INTS10Q9NVR2 710 aaKnown RBP13.65□□□□□ -0.22
TRIM56-201ENST00000306085 VANGL2Q9ULK5 521 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 UBE2Q1Q7Z7E8 422 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 TRNT1Q96Q11 434 aaKnown RBP13.65□□□□□ -0.22
TRIM56-201ENST00000306085 NUDT12Q9BQG2 462 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 CCDC167Q9P0B6 97 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 STARD13Q9Y3M8 1113 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ABCA5Q8WWZ7 1642 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 UCHL3P15374 230 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 GEMP55040 296 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 CDC42P60953 191 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.65□□□□□ -0.22
TRIM56-201ENST00000306085 UCMAQ8WVF2 138 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 KLF15Q9UIH9 416 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 TFDP3Q5H9I0 405 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 LRRC69Q6ZNQ3 347 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 BRINP3Q76B58 766 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 MID1IP1Q9NPA3 183 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 AGPAT5Q9NUQ2 364 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 EMC3Q9P0I2 261 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 PCDHA10Q9Y5I2 948 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 O00370 1275 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 ZHX1-C8orf76Q96EF9 292 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 SLC6A15Q9H2J7 730 aa13.65□□□□□ -0.22
TRIM56-201ENST00000306085 GNB5O14775 395 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 RIPK1Q13546 671 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 DENND5AQ6IQ26 1287 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 PTAR1Q7Z6K3 402 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 FATE1Q969F0 183 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 Q96MT0 163 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 RPRD1AQ96P16 312 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 MTG1Q9BT17 334 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 VPS28Q9UK41 221 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 AFF2P51816 1311 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 A0A1W2PQ72 361 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 CBWD3Q5JTY5 395 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 CBWD5Q5RIA9 395 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 SLCO1B7G3V0H7 640 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 M0QYT0 321 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 ODC1P11926 461 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 UBA1P22314 1058 aaKnown RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 BOP1Q14137 746 aaKnown RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 CCDC54Q8NEL0 328 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 KBTBD8Q8NFY9 601 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 CASKIN2Q8WXE0 1202 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 PAFAH2Q99487 392 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 CUEDC1Q9NWM3 386 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 CROTQ9UKG9 612 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 ARFIP1P53367 373 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 OGFRL1Q5TC84 451 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 BROXQ5VW32 411 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 REPS1Q96D71 796 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 GMCL1Q96IK5 515 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 GPER1Q99527 375 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms