RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 KCNU1A8MYU2 1149 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 F5H5T6 163 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 BCAT2O15382 392 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 RNASEH1O60930 286 aaKnown RBP17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 SRPRAP08240 638 aaKnown RBP17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 ABCB4P21439 1286 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 TACR2P21452 398 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 CCR1P32246 355 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 KRT9P35527 623 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 CSKP41240 450 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 OXCT1P55809 520 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 RPS24P62847 133 aaKnown RBP17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 ST3GAL2Q16842 350 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 DCAF6Q58WW2 860 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 ZNF776Q68DI1 518 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 CHSY1Q86X52 802 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 ZDHHC17Q8IUH5 632 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 SLC2A13Q96QE2 648 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 PPP1R9BQ96SB3 815 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 BTBD1Q9H0C5 482 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 FAM204AQ9H8W3 233 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 SGK2Q9HBY8 427 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 ACP6Q9NPH0 428 aa17.25■□□□□ 0.35
TRAPPC1-201ENST00000303731 USP24Q9UPU5 2620 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 H0Y626 953 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 TRIM16O95361 564 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 CER1O95813 267 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 MAOBP27338 520 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 RPS14P62263 151 aaKnown RBP17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 GRIK2Q13002 908 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 EIF4EBP2Q13542 120 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 HNRNPA1L2Q32P51 320 aaKnown RBP17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 ZC3H12AQ5D1E8 599 aaKnown RBP17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 PITRM1Q5JRX3 1037 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 RABGAP1LQ5R372 815 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 C11orf57Q6ZUT1 292 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 USP30Q70CQ3 517 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 CACUL1Q86Y37 369 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 LGI2Q8N0V4 545 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 ZCCHC9Q8N567 271 aaKnown RBP17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 CPXM1Q96SM3 734 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 MIR1-1HGQ9H1L0 117 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 NUP62CLQ9H1M0 184 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 RSPH9Q9H1X1 276 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 NDST4Q9H3R1 872 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 OSGEPQ9NPF4 335 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 FSCN3Q9NQT6 498 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 RRN3Q9NYV6 651 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 DNAJC12Q9UKB3 198 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 NCKAP1Q9Y2A7 1128 aa17.24■□□□□ 0.35
TRAPPC1-201ENST00000303731 TARSL2A2RTX5 802 aaKnown RBP17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 GJB3O75712 270 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 SEMA4FO95754 770 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 ZNF883P0CG24 379 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 AFF3P51826 1226 aaKnown RBP17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 SULT2A1Q06520 285 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 FOXC1Q12948 553 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 VWA3BQ502W6 1294 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 RNF219Q5W0B1 726 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 RAP1GAP2Q684P5 730 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 FAM124AQ86V42 546 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 WDTC1Q8N5D0 677 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 ZNF366Q8N895 744 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 C1orf131Q8NDD1 294 aaKnown RBP17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 RNF34Q969K3 372 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 MYO19Q96H55 970 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 TUBGCP2Q9BSJ2 902 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 SYNCQ9H7C4 482 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 SIX2Q9NPC8 291 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 DDIT4Q9NX09 232 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 INTS6Q9UL03 887 aaKnown RBP17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 NUMA1Q14980 2115 aa17.23■□□□□ 0.35
TRAPPC1-201ENST00000303731 ITIH6Q6UXX5 1313 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 EDDM13A0A1B0GTR0 161 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 A0A1B0GVM2 712 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 TCAF2A6NFQ2 919 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 CD59P13987 128 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 NNMTP40261 264 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 ECT2LQ008S8 904 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 TEAD4Q15561 434 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 DPCR1Q3MIW9 517 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 SLC26A9Q7LBE3 791 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 FAM71AQ8IYT1 594 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 DEFB106AQ8N104 65 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 CFAP52Q8N1V2 620 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 ZNF397Q8NF99 534 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 MRGPRX3Q96LB0 322 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 EIF2B4Q9UI10 523 aaKnown RBP17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 XPO7Q9UIA9 1087 aaKnown RBP17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 TPX2Q9ULW0 747 aaKnown RBP17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 WASF3Q9UPY6 502 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 ERVW-1Q9UQF0 538 aa17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC1-201ENST00000303731 FOXN3O00409 490 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 DAB1O75553 588 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 EEF1GP26641 437 aaKnown RBP17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 ACSL1P33121 698 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 NOS2P35228 1153 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 CLCN1P35523 988 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 MATKP42679 507 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms