RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 GMIPQ9P107 970 aa10.9□□□□□ -0.66
CLP1-201ENST00000302731 PSMC3IPQ9P2W1 217 aaPredicted RBP10.9□□□□□ -0.66
CLP1-201ENST00000302731 AFF4Q9UHB7 1163 aaKnown RBP10.9□□□□□ -0.66
CLP1-201ENST00000302731 CDY1Q9Y6F8 540 aa10.9□□□□□ -0.66
CLP1-201ENST00000302731 COL4A6Q14031 1691 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 ERI2A8K979 691 aaKnown RBP10.89□□□□□ -0.67
CLP1-201ENST00000302731 KIAA0355O15063 1070 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 MSI1O43347 362 aaKnown RBP10.89□□□□□ -0.67
CLP1-201ENST00000302731 BANF1O75531 89 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 UPP2O95045 317 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 TIMP1P01033 207 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 APOEP02649 317 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 SOD2P04179 222 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 PTPN3P26045 913 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 STX2P32856 288 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 PBX3P40426 434 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 SLC18A1P54219 525 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 TBX4P57082 545 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 TAF10Q12962 218 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 DUSP4Q13115 394 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 TRIP4Q15650 581 aaPredicted RBP10.89□□□□□ -0.67
CLP1-201ENST00000302731 HP1BP3Q5SSJ5 553 aaPredicted RBP10.89□□□□□ -0.67
CLP1-201ENST00000302731 ARTNQ5T4W7 220 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 FAXCQ5TGI0 409 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 TPGS2Q68CL5 300 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 ITPRIPL1Q6GPH6 555 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 LRRC8BQ6P9F7 803 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 ADGRD1Q6QNK2 874 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 CYS1Q717R9 158 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 ZNF534Q76KX8 674 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 TAS1R1Q7RTX1 841 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 CCNJLQ8IV13 435 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 GPR65Q8IYL9 337 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 CMTR2Q8IYT2 770 aaKnown RBP10.89□□□□□ -0.67
CLP1-201ENST00000302731 ZNF567Q8N184 647 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 SEPT5Q99719 369 aaPredicted RBP10.89□□□□□ -0.67
CLP1-201ENST00000302731 UBE2OQ9C0C9 1292 aaKnown RBP10.89□□□□□ -0.67
CLP1-201ENST00000302731 CRISPLD1Q9H336 500 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 CCDC134Q9H6E4 229 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 PPARGC1AQ9UBK2 798 aaKnown RBP10.89□□□□□ -0.67
CLP1-201ENST00000302731 CTNNAL1Q9UBT7 734 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 CHMP2BQ9UQN3 213 aa10.89□□□□□ -0.67
CLP1-201ENST00000302731 WDR27A2RRH5 827 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 BAIAP3O94812 1187 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 IGLV3-27P01718 113 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 CHN1P15882 459 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 LAG3P18627 525 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 CCNCP24863 283 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 DSG1Q02413 1049 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 ZSCAN26Q16670 478 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 TEX44Q53QW1 395 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 SNX30Q5VWJ9 437 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 NUGGCQ68CJ6 796 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 KIAA1841Q6NSI8 718 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 PRSS55Q6UWB4 352 aaPredicted RBP10.88□□□□□ -0.67
CLP1-201ENST00000302731 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 TRABD2AQ86V40 505 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 IGDCC3Q8IVU1 814 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 KLHDC8BQ8IXV7 354 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 SLC39A11Q8N1S5 342 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 ATP6V0D2Q8N8Y2 350 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 PDZD8Q8NEN9 1154 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 FBF1Q8TES7 1133 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 LRRN4Q8WUT4 740 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 BTN2A3PQ96KV6 586 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 SIGLEC10Q96LC7 697 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 ZNF558Q96NG5 402 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 XPO6Q96QU8 1125 aaKnown RBP10.88□□□□□ -0.67
CLP1-201ENST00000302731 SELENOSQ9BQE4 189 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 NAT9Q9BTE0 207 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 HERC2P3Q9BVR0 1158 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 SIK2Q9H0K1 926 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 KLHL8Q9P2G9 620 aaPredicted RBP10.88□□□□□ -0.67
CLP1-201ENST00000302731 STK39Q9UEW8 545 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 ZC3H7BQ9UGR2 993 aaKnown RBP10.88□□□□□ -0.67
CLP1-201ENST00000302731 MAFFQ9ULX9 164 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 SLC27A5Q9Y2P5 690 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 SNX10Q9Y5X0 201 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 HS3ST4Q9Y661 456 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 GREB1Q4ZG55 1949 aa10.88□□□□□ -0.67
CLP1-201ENST00000302731 ZNF638Q14966 1978 aaKnown RBP10.88□□□□□ -0.67
CLP1-201ENST00000302731 TCRBV9S1A1TA0A576 114 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 SLC38A8A6NNN8 435 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 RASA4BC9J798 803 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 E9PAM4 449 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 POC1B-GALNT4F8VUJ3 575 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 RASA4O43374 803 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 AVILO75366 819 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 SUN1O94901 812 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 ABLIM3O94929 683 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 CPP00450 1065 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 SRGAP2BP0DMP2 458 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 BRAFP15056 766 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 ATF6P18850 670 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 PRKCHP24723 683 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 OR1D2P34982 312 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 MSH2P43246 934 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 TMED2Q15363 201 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 LRRC26Q2I0M4 334 aa10.87□□□□□ -0.67
CLP1-201ENST00000302731 AFMIDQ63HM1 303 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms