RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 CALRP27797 417 aaKnown RBP13.9□□□□□ -0.18
CTTN-201ENST00000301843 MRPS22P82650 360 aaKnown RBP13.9□□□□□ -0.18
CTTN-201ENST00000301843 GRM1Q13255 1194 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 MED21Q13503 144 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 LIN52Q52LA3 116 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 NCBP2-AS2Q69YL0 99 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 PDSS2Q86YH6 399 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 MFN1Q8IWA4 741 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 GALNT4Q8N4A0 578 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 HTR3CQ8WXA8 447 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 ARNTL2Q8WYA1 636 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 LENG8Q96PV6 779 aaPredicted RBP13.9□□□□□ -0.18
CTTN-201ENST00000301843 MOCS1Q9NZB8 636 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 CACNG4Q9UBN1 327 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 AOC1P19801 751 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 BAG6P46379 1132 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 NUDT2P50583 147 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 PDK2Q15119 407 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 NOL9Q5SY16 702 aaKnown RBP13.9□□□□□ -0.18
CTTN-201ENST00000301843 LCLAT1Q6UWP7 414 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 MOB2Q70IA6 237 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 CDKL3Q8IVW4 592 aaPredicted RBP13.9□□□□□ -0.18
CTTN-201ENST00000301843 DCLK2Q8N568 766 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 ZNF669Q96BR6 464 aaPredicted RBP13.9□□□□□ -0.18
CTTN-201ENST00000301843 ZMAT2Q96NC0 199 aaKnown RBP13.9□□□□□ -0.18
CTTN-201ENST00000301843 GOLGA2P5Q9HBQ8 144 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 ETAA1Q9NY74 926 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 KLK14Q9P0G3 267 aa13.9□□□□□ -0.18
CTTN-201ENST00000301843 SSC5DA1L4H1 1573 aa13.9□□□□□ -0.19
CTTN-201ENST00000301843 ZBTB7AO95365 584 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 HSPA4LO95757 839 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
CTTN-201ENST00000301843 VCLP18206 1134 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 MPSTP25325 297 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 HSP90AA5PQ58FG0 334 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 SPATA16Q9BXB7 569 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 TXNRD2Q9NNW7 524 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 COPG2Q9UBF2 871 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 WDR90Q96KV7 1748 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 A0A1B0GTW7 788 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 JUNP05412 331 aaKnown RBP13.89□□□□□ -0.19
CTTN-201ENST00000301843 GSTA2P09210 222 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 MAGEA3P43357 314 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 NUMBP49757 651 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 SH3D19Q5HYK7 790 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 NXNQ6DKJ4 435 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 IYDQ6PHW0 289 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 MTHFD1LQ6UB35 978 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 PPP2R3CQ969Q6 453 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 MFSD3Q96ES6 412 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 P2RY11Q96G91 374 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 C2orf40Q9H1Z8 148 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 SNX15Q9NRS6 342 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 PDP2Q9P2J9 529 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
CTTN-201ENST00000301843 TNFSF13BQ9Y275 285 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.89□□□□□ -0.19
CTTN-201ENST00000301843 SERPINE1P05121 402 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 ITGA7Q13683 1181 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 POTEAQ6S8J7 498 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 PID1Q7Z2X4 250 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 PIP4K2CQ8TBX8 421 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 KLHL4Q9C0H6 718 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 SPATC1LQ9H0A9 340 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 SNTG2Q9NY99 539 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 GJD2Q9UKL4 321 aa13.89□□□□□ -0.19
CTTN-201ENST00000301843 TK2O00142 265 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 CLDN5O00501 218 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 PHGDHO43175 533 aaKnown RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 CPA3P15088 417 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 AKAP5P24588 427 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 IGFBP6P24592 240 aaPredicted RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 CDK7P50613 346 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 ABCE1P61221 599 aaKnown RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 ZNF460Q14592 562 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 KIZQ2M2Z5 673 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 DCAF6Q58WW2 860 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 TMCO4Q5TGY1 634 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 STRA8Q7Z7C7 330 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 DNAAF3Q8N9W5 541 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 RTP4Q96DX8 246 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 CNBD2Q96M20 576 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 NUF2Q9BZD4 464 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 SNX10Q9Y5X0 201 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 LAMA3Q16787 3333 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 GLRA3O75311 464 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 IL1BP01584 269 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 COX4I1P13073 169 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 ENO3P13929 434 aaPredicted RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 NDUFV1P49821 464 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 VGLL4Q14135 290 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 ACAP1Q15027 740 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 PDK3Q15120 406 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 FAM91A1Q658Y4 838 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 LBX2Q6XYB7 198 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 SNX32Q86XE0 403 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 ZSCAN18Q8TBC5 510 aaPredicted RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 ATP2A3Q93084 1043 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 SGF29Q96ES7 293 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms