RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CAAP1Q9H8G2 361 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.16□□□□□ -0.62
ZNF558-201ENST00000301475 TCF7L2Q9NQB0 619 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 GPATCH2LQ9NWQ4 482 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 ADGRA2Q96PE1 1338 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 KIAA1217Q5T5P2 1943 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 PLOD2O00469 737 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
ZNF558-201ENST00000301475 H6PDO95479 791 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 P4HA1P13674 534 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 CD19P15391 556 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 FGFR3P22607 806 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 IL4RP24394 825 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 MLH1P40692 756 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 BAG6P46379 1132 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 OXCT1P55809 520 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 SP4Q02446 784 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 IL23RQ5VWK5 629 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 C16orf89Q6UX73 402 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.15□□□□□ -0.62
ZNF558-201ENST00000301475 SLC7A3Q8WY07 619 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 RNF157Q96PX1 679 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 DCUN1D5Q9BTE7 237 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 ACSS2Q9NR19 701 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 OLAHQ9NV23 265 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 PIH1D1Q9NWS0 290 aaKnown RBP11.15□□□□□ -0.62
ZNF558-201ENST00000301475 MTMR10Q9NXD2 777 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 PCDHA10Q9Y5I2 948 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.15□□□□□ -0.62
ZNF558-201ENST00000301475 PTPRFP10586 1907 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 SIP14410 1827 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 ARHGEF37A1IGU5 675 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 WDR27A2RRH5 827 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 F5H423 210 aaPredicted RBP11.15□□□□□ -0.62
ZNF558-201ENST00000301475 H3BNH8 94 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 NEMP1O14524 444 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 ACOT8O14734 319 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 SERPINB7O75635 380 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 ENO3P13929 434 aaPredicted RBP11.15□□□□□ -0.62
ZNF558-201ENST00000301475 TCN1P20061 433 aaPredicted RBP11.15□□□□□ -0.62
ZNF558-201ENST00000301475 CNTFP26441 200 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 POLR2BP30876 1174 aaKnown RBP11.15□□□□□ -0.62
ZNF558-201ENST00000301475 TGFB2P61812 414 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 TGFBIQ15582 683 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 C15orf59Q2T9L4 293 aaPredicted RBP11.15□□□□□ -0.62
ZNF558-201ENST00000301475 CMC1Q7Z7K0 106 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 ATP6V1E2Q96A05 226 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 TMEM143Q96AN5 459 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 EME1Q96AY2 570 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 COQ10BQ9H8M1 238 aa11.15□□□□□ -0.62
ZNF558-201ENST00000301475 BCAS2O75934 225 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CSPG5O95196 566 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 F7P08709 466 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 ASPAP45381 313 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 RAP1GAPP47736 663 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 YWHAEP62258 255 aaKnown RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PRKCEQ02156 737 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 RELAQ04206 551 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PDAP1Q13442 181 aaKnown RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 TFDP2Q14188 446 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CDO1Q16878 200 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 FAM160B2Q86V87 743 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CCDC60Q8IWA6 550 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CPXCR1Q8N123 301 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PLD6Q8N2A8 252 aaKnown RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 FIBCD1Q8N539 461 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 SLC4A11Q8NBS3 891 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 ZSCAN18Q8TBC5 510 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PIWIL1Q96J94 861 aaKnown RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 ZNF597Q96LX8 424 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 WRNIP1Q96S55 665 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 FERMT1Q9BQL6 677 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 SLC38A7Q9NVC3 462 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 DCDC2Q9UHG0 476 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 VPS28Q9UK41 221 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 TRIM43BA6NCK2 446 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 HSPA4LO95757 839 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 OATP04181 439 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 SLC5A3P53794 718 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 RPS6P62753 249 aaKnown RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 IKBKEQ14164 716 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 MTERF2Q49AM1 385 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 KCTD21Q4G0X4 260 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 FAM47CQ5HY64 1035 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 SWSAP1Q6NVH7 229 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 MYO1HQ8N1T3 1032 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 DLG3Q92796 817 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 ATP2A3Q93084 1043 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 ISOC1Q96CN7 298 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 WDR41Q9HAD4 459 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 IGSF9Q9P2J2 1179 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 NR2E3Q9Y5X4 410 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CDY2AQ9Y6F7 541 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CDY1Q9Y6F8 540 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 SQORQ9Y6N5 450 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 BCLAF3A2AJT9 711 aaKnown RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 RGSL1A5PLK6 1076 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 LRRIQ4A6NIV6 560 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PIGRP01833 764 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms