RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 HBS1LQ9Y450 684 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 GOLGA6CA6NDK9 693 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 GOLGA8MH3BSY2 632 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 RNF103O00237 685 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 OPHN1O60890 802 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 LILRB3O75022 631 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 IGLV3-27P01718 113 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 LINC00271P0C7V0 271 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 GOLGA6DP0CG33 693 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 VAV1P15498 845 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 ATP2A2P16615 1042 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 HMGA1P17096 107 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 TUBP50607 506 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 PPIDQ08752 370 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 TWF1Q12792 350 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 PLD1Q13393 1074 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 KYNUQ16719 465 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 KRT71Q3SY84 523 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 ANKRD20A2Q5SQ80 823 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 HECTD3Q5T447 861 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 ANKRD20A1Q5TYW2 823 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 ANKRD20A3Q5VUR7 823 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 KLHDC10Q6PID8 442 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 NPWQ8N729 165 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 TMBIM4Q9HC24 238 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 GOLGA6AQ9NYA3 693 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 NINJ2Q9NZG7 142 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 NEU3Q9UQ49 428 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 ZNF840PA6NDX5 716 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 HMGB1P1B2RPK0 211 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 GARSP41250 739 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 MAGEA6P43360 314 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 ZNF33AQ06730 810 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 PDIA2Q13087 525 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 TMC7Q7Z402 723 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 ITIH5Q86UX2 942 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 EXOC4Q96A65 974 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 ARL8AQ96BM9 186 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 LBHD1Q9BQE6 289 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 CENPHQ9H3R5 247 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 ETNK1Q9HBU6 452 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 SEPT10Q9P0V9 454 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 INSL5Q9Y5Q6 135 aa16.16■□□□□ 0.18
HERPUD1-201ENST00000300302 E7EVH7 732 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 ALOX15BO15296 676 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 TMEM63AO94886 807 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 SHBGP04278 402 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 HMBSP08397 361 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 FDFT1P37268 417 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 TTMPQ5BVD1 217 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 MS4A13Q5J8X5 152 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 PIK3R6Q5UE93 754 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 ZBED8Q8IZ13 594 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 NETO2Q8NC67 525 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 ATP6V1G3Q96LB4 118 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 C9orf72Q96LT7 481 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 CCDC77Q9BR77 488 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 TMEM109Q9BVC6 243 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 ROPN1BQ9BZX4 212 aaPredicted RBP16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 ROPN1Q9HAT0 212 aaPredicted RBP16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 PPARGC1AQ9UBK2 798 aaKnown RBP16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 RWDD3Q9Y3V2 267 aa16.15■□□□□ 0.18
HERPUD1-201ENST00000300302 TCRBV7S3A2A0A539 114 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 CXCL14O95715 111 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 ADH1AP07327 375 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 APRTP07741 180 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 CNPP09543 421 aaKnown RBP16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 AUHQ13825 339 aaKnown RBP16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 RTL3Q8N8U3 475 aaKnown RBP16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 PSMG2Q969U7 264 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 VAT1Q99536 393 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 VANGL2Q9ULK5 521 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 LZTS1Q9Y250 596 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 WASH4PA8MWX3 477 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 E7ESA3 106 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 METTL18O95568 372 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 ABHD2P08910 425 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 TPSB2P20231 275 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 CTNNB1P35222 781 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 BMPR1AP36894 532 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 SARNPP82979 210 aaKnown RBP16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 SEMA5AQ13591 1074 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 TPSAB1Q15661 275 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 C6orf118Q5T5N4 469 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 FAXCQ5TGI0 409 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 DNAJB7Q7Z6W7 309 aaPredicted RBP16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 TP53INP2Q8IXH6 220 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 CCDC13Q8IYE1 715 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 MCUQ8NE86 351 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 UHMK1Q8TAS1 419 aaKnown RBP16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 FAM76AQ8TAV0 307 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 PYROXD1Q8WU10 500 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 CELF6Q96J87 481 aaKnown RBP16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 EMILIN2Q9BXX0 1053 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 ZYG11BQ9C0D3 744 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 TRHDEQ9UKU6 1024 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 ASB3Q9Y575 518 aa16.14■□□□□ 0.17
HERPUD1-201ENST00000300302 CLUHO75153 1309 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms