RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MAFO75444 373 aaPredicted RBP13.61□□□□□ -0.23
CASC4-201ENST00000299957 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 MT-ND1P03886 318 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 STMN1P16949 149 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 MAXP61244 160 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 DYNC1I2Q13409 638 aaKnown RBP13.61□□□□□ -0.23
CASC4-201ENST00000299957 NOMO1Q15155 1222 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 WSCD1Q658N2 575 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 NOTUMQ6P988 496 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 CATSPERGQ6ZRH7 1159 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 LDB1Q86U70 411 aaPredicted RBP13.61□□□□□ -0.23
CASC4-201ENST00000299957 MIER2Q8N344 545 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 CRYGNQ8WXF5 182 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 NPAS2Q99743 824 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 MRIQ9BWK5 157 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 VPS33BQ9H267 617 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 FAM96AQ9H5X1 160 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 EFCAB1Q9HAE3 211 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 ZNF142P52746 1687 aaPredicted RBP13.61□□□□□ -0.23
CASC4-201ENST00000299957 SMAPO00193 183 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 BPGMP07738 259 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 YBX3P16989 372 aaKnown RBP eCLIP13.61□□□□□ -0.23
CASC4-201ENST00000299957 NDUFV1P49821 464 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 SERPINB8P50452 374 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 PLEKHG4Q58EX7 1191 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 C16orf89Q6UX73 402 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 CCDC185Q8N715 623 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 PPP2R3CQ969Q6 453 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 ERLEC1Q96DZ1 483 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 CHRAC1Q9NRG0 131 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 BAG5Q9UL15 447 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 PPEF2O14830 753 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 RGL2O15211 777 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 BST2Q10589 180 aaKnown RBP13.6□□□□□ -0.23
CASC4-201ENST00000299957 STILQ15468 1287 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 GALNTL6Q49A17 601 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 DNAJC14Q6Y2X3 702 aaPredicted RBP13.6□□□□□ -0.23
CASC4-201ENST00000299957 DCBLD1Q8N8Z6 715 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 B4GALNT2Q8NHY0 566 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 FBXO27Q8NI29 283 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 ECSITQ9BQ95 431 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 GPAMQ9HCL2 828 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 NT5MQ9NPB1 228 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 DDX43Q9NXZ2 648 aaKnown RBP13.6□□□□□ -0.23
CASC4-201ENST00000299957 SLC7A8Q9UHI5 535 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 HBS1LQ9Y450 684 aaKnown RBP13.6□□□□□ -0.23
CASC4-201ENST00000299957 ARHGEF37A1IGU5 675 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 KLRG2A4D1S0 409 aaPredicted RBP13.6□□□□□ -0.23
CASC4-201ENST00000299957 TK2O00142 265 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 SNX2O60749 519 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 ERCC2P18074 760 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 NFKB1P19838 968 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 FDFT1P37268 417 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 ABCE1P61221 599 aaKnown RBP13.6□□□□□ -0.23
CASC4-201ENST00000299957 CCDC142Q17RM4 750 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 PACS1Q6VY07 963 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 PNPLA1Q8N8W4 532 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 SLC35B2Q8TB61 432 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 CERS2Q96G23 380 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 EGFL8Q99944 293 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 TMEM79Q9BSE2 394 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 SNX15Q9NRS6 342 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 ZNF214Q9UL59 606 aaPredicted RBP13.6□□□□□ -0.23
CASC4-201ENST00000299957 C4AP0C0L4 1744 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 C4BP0C0L5 1744 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 ARHGAP10A1A4S6 786 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 SUPT3HB4E1H0 165 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 CHADO15335 359 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 BEX3Q00994 111 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 RALGDSQ12967 914 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 CAPRIN1Q14444 709 aaKnown RBP13.6□□□□□ -0.23
CASC4-201ENST00000299957 RBBP7Q16576 425 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 SDHAF4Q5VUM1 108 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 RHBDF2Q6PJF5 856 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 ZBTB49Q6ZSB9 765 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 TREML1Q86YW5 311 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 VPS50Q96JG6 964 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 ZFP42Q96MM3 310 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 TXLNGYQ9BZA5 131 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
CASC4-201ENST00000299957 EBF3Q9H4W6 596 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 COG4Q9H9E3 785 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 EBF2Q9HAK2 575 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 ZNF212Q9UDV6 495 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 SPATA31A6Q5VVP1 1343 aa13.6□□□□□ -0.23
CASC4-201ENST00000299957 E5RI56 91 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 GRK2P25098 689 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 LMO2P25791 158 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 NFKBIAP25963 317 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 SKIV2L2P42285 1042 aaKnown RBP13.59□□□□□ -0.23
CASC4-201ENST00000299957 ZNF235Q14590 738 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 GRIK4Q16099 956 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 POTEAQ6S8J7 498 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 CLEC4FQ8N1N0 589 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 LENG8Q96PV6 779 aaPredicted RBP13.59□□□□□ -0.23
CASC4-201ENST00000299957 MAP3K20Q9NYL2 800 aaKnown RBP13.59□□□□□ -0.23
CASC4-201ENST00000299957 MYOCOSA0A1B0GUC4 107 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 MFSD11O43934 449 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms