RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 NUP107P57740 925 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 ENPEPQ07075 957 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 FAM160B2Q86V87 743 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 PQLC3Q8N755 202 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 TMEM102Q8N9M5 508 aaPredicted RBP13.35□□□□□ -0.27
TVP23A-201ENST00000299866 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 LRTOMTQ8WZ04 291 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 LRRC39Q96DD0 335 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 RMND5BQ96G75 393 aaPredicted RBP13.35□□□□□ -0.27
TVP23A-201ENST00000299866 PGLYRP2Q96PD5 576 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 ARMC7Q9H6L4 198 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 C20orf96Q9NUD7 363 aaPredicted RBP13.35□□□□□ -0.27
TVP23A-201ENST00000299866 PADI4Q9UM07 663 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 WDR37Q9Y2I8 494 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 SIPA1L1O43166 1804 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 LOXHD1Q8IVV2 1947 aa13.35□□□□□ -0.27
TVP23A-201ENST00000299866 CLRN2A0PK11 232 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 ICAM1P05362 532 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 MPSTP25325 297 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 CCR10P46092 362 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 ALDH3B2P48448 385 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 PRKCEQ02156 737 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 ZNF699Q32M78 642 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 SLC9A4Q6AI14 798 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 PLD6Q8N2A8 252 aaKnown RBP13.34□□□□□ -0.27
TVP23A-201ENST00000299866 TMEM130Q8N3G9 435 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 CDKL2Q92772 493 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
TVP23A-201ENST00000299866 NPAS2Q99743 824 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 NGRNQ9NPE2 291 aaKnown RBP13.34□□□□□ -0.27
TVP23A-201ENST00000299866 PCDHGC3Q9UN70 934 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 PCDHB12Q9Y5F1 795 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 CHRNGP07510 517 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 PDGFRAP16234 1089 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
TVP23A-201ENST00000299866 RELAQ04206 551 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 ARHGEF16Q5VV41 709 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 SLFN12LQ6IEE8 588 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 FNIP1Q8TF40 1166 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 RXFP2Q8WXD0 754 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 ATP6V0A1Q93050 837 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 THAP11Q96EK4 314 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 ABHD8Q96I13 439 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 INO80BQ9C086 356 aaPredicted RBP13.34□□□□□ -0.27
TVP23A-201ENST00000299866 MOCS1Q9NZB8 636 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 FEM1BQ9UK73 627 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 SNX13Q9Y5W8 968 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 H3BNH8 94 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 LDHAP00338 332 aaKnown RBP13.34□□□□□ -0.27
TVP23A-201ENST00000299866 KRT19P08727 400 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 ERVK-10P10266 1014 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 CNTFP26441 200 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 LSM12Q3MHD2 195 aaKnown RBP13.34□□□□□ -0.27
TVP23A-201ENST00000299866 SLC27A3Q5K4L6 730 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 GPR141Q7Z602 305 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 UBA3Q8TBC4 463 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 ACMSDQ8TDX5 336 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 ERLEC1Q96DZ1 483 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 BIRC8Q96P09 236 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 SLC29A1Q99808 456 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 CIB1Q99828 191 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 PCDHAC1Q9H158 963 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 TBC1D23Q9NUY8 699 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 CDC14AQ9UNH5 594 aa13.34□□□□□ -0.27
TVP23A-201ENST00000299866 KANSL1LA0AUZ9 987 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 GLDCP23378 1020 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 OSTNP61366 133 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 TGFB2P61812 414 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 PHEXP78562 749 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 ATP1A4Q13733 1029 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 STILQ15468 1287 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 EML3Q32P44 896 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 CCDC60Q8IWA6 550 aaPredicted RBP13.33□□□□□ -0.28
TVP23A-201ENST00000299866 PCDH20Q8N6Y1 951 aaKnown RBP13.33□□□□□ -0.28
TVP23A-201ENST00000299866 SLC35B4Q969S0 331 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 C12orf43Q96C57 262 aaKnown RBP13.33□□□□□ -0.28
TVP23A-201ENST00000299866 RANBP9Q96S59 729 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 ACO2Q99798 780 aaKnown RBP13.33□□□□□ -0.28
TVP23A-201ENST00000299866 CBFA2T3O75081 653 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 SEC24DO94855 1032 aaPredicted RBP13.33□□□□□ -0.28
TVP23A-201ENST00000299866 ZFXP17010 805 aaPredicted RBP13.33□□□□□ -0.28
TVP23A-201ENST00000299866 ALDH1B1P30837 517 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 CAP2P40123 477 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 PHKA2P46019 1235 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 RXRGP48443 463 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 ESRRGP62508 458 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 EMC2Q15006 297 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 CA9Q16790 459 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 STXBP5Q5T5C0 1151 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 OR6B2Q6IFH4 312 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 OGFOD2Q6N063 350 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 XKR5Q6UX68 686 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 MCF2L2Q86YR7 1114 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 MCUQ8NE86 351 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 PCDH19Q8TAB3 1148 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 COX4I2Q96KJ9 171 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 DHX35Q9H5Z1 703 aaKnown RBP13.33□□□□□ -0.28
TVP23A-201ENST00000299866 RMI1Q9H9A7 625 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 OLAHQ9NV23 265 aa13.33□□□□□ -0.28
TVP23A-201ENST00000299866 COQ6Q9Y2Z9 468 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms