RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 DNTTP04053 509 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 ABCB4P21439 1286 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 TACR2P21452 398 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 CCR1P32246 355 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 CLCN1P35523 988 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 CSKP41240 450 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 RPS14P62263 151 aaKnown RBP14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 MTA1Q13330 715 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 TTC31Q49AM3 519 aaPredicted RBP14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 FSCBQ5H9T9 825 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 RAP1GAP2Q684P5 730 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 C11orf57Q6ZUT1 292 aaPredicted RBP14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 PIP4P1Q86T03 277 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 FAM124AQ86V42 546 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 CHSY1Q86X52 802 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 PASD1Q8IV76 773 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 FAM71AQ8IYT1 594 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 DEFB106AQ8N104 65 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 MYEOVQ96EZ4 313 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 SLC2A13Q96QE2 648 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 FAM204AQ9H8W3 233 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 DNAAF2Q9NVR5 837 aaKnown RBP14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 XPO7Q9UIA9 1087 aaKnown RBP14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 INTS6Q9UL03 887 aaKnown RBP14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 SCML1Q9UN30 329 aa14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 F5H5T6 163 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 BCAT2O15382 392 aaPredicted RBP14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 RNASEH1O60930 286 aaKnown RBP14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 SRPRAP08240 638 aaKnown RBP14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 SFSWAPQ12872 951 aaKnown RBP14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 SLC12A1Q13621 1099 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 HNRNPDQ14103 355 aaKnown RBP14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 ARID5BQ14865 1188 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 HNRNPA1L2Q32P51 320 aaKnown RBP14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 PITRM1Q5JRX3 1037 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 MIIPQ5JXC2 388 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 ZNF776Q68DI1 518 aaPredicted RBP14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 OR6B2Q6IFH4 312 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 SLC47A2Q86VL8 602 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 ZDHHC17Q8IUH5 632 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 C1orf131Q8NDD1 294 aaKnown RBP14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 RNF34Q969K3 372 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 MYO19Q96H55 970 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 BTBD1Q9H0C5 482 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 MIR1-1HGQ9H1L0 117 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 SYNCQ9H7C4 482 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 DDIT4Q9NX09 232 aa14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 AJAP1Q9UKB5 411 aaPredicted RBP14.35□□□□□ -0.11
TMEM41B-201ENST00000299596 TARSL2A2RTX5 802 aaKnown RBP14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 PES1O00541 588 aaKnown RBP14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 ACSL1P33121 698 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 OXCT1P55809 520 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 PITX1P78337 314 aaPredicted RBP14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 ECT2LQ008S8 904 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 SLC6A3Q01959 620 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 RABGAP1LQ5R372 815 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 TTC39BQ5VTQ0 682 aaPredicted RBP14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 RNF219Q5W0B1 726 aaPredicted RBP14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 OLFML1Q6UWY5 402 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 MMS22LQ6ZRQ5 1243 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 CLEC17AQ6ZS10 378 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 FAM183BPQ6ZVS7 135 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 ZCCHC9Q8N567 271 aaKnown RBP14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 MRGPRX3Q96LB0 322 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 PPP1R9BQ96SB3 815 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 PRMT1Q99873 361 aaKnown RBP14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 RSPH9Q9H1X1 276 aaPredicted RBP14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 PDCL3Q9H2J4 239 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 SGK2Q9HBY8 427 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 RRN3Q9NYV6 651 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 EIF2B4Q9UI10 523 aaKnown RBP14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 ERVW-1Q9UQF0 538 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 NCKAP1Q9Y2A7 1128 aa14.34□□□□□ -0.11
TMEM41B-201ENST00000299596 SYNJ2BP-COX16A0A087WUM0 186 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 GJB3O75712 270 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 GRAP2O75791 330 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 SEMA4FO95754 770 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 CD59P13987 128 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 EEF1GP26641 437 aaKnown RBP14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 NOS2P35228 1153 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 ANP32AP39687 249 aaKnown RBP14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 NNMTP40261 264 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 KCNMA1Q12791 1236 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 FOXC1Q12948 553 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 GRIK2Q13002 908 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 RAPGEF1Q13905 1077 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 KCNJ12Q14500 433 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 DRAP1Q14919 205 aaPredicted RBP14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 HSP90AA4PQ58FG1 418 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 KLHDC7AQ5VTJ3 777 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 DPY19L2P1Q6NXN4 242 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 IL27RAQ6UWB1 636 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 USP30Q70CQ3 517 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 SLC26A9Q7LBE3 791 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 CCAR2Q8N163 923 aaKnown RBP14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 TMEM35BQ8NCS4 154 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 ZNF397Q8NF99 534 aaPredicted RBP14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 OR2I1PQ8NGU4 316 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 C6orf106Q9H6K1 298 aaPredicted RBP14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 TMEM51Q9NW97 253 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms