RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ZBTB49Q6ZSB9 765 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 BRSK2Q8IWQ3 736 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 LRRC71Q8N4P6 559 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 PGLYRP2Q96PD5 576 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 CDH19Q9H159 772 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 DHX33Q9H6R0 707 aaKnown RBP11.69□□□□□ -0.54
TRUB1-201ENST00000298746 SLC39A10Q9ULF5 831 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 A0A096LPK6 155 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 SAC3D1A6NKF1 404 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 H3BNX3 289 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 TRIM13O60858 407 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 CHRNGP07510 517 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 EEF1B2P24534 225 aaKnown RBP11.68□□□□□ -0.54
TRUB1-201ENST00000298746 NAMPTP43490 491 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 PHEXP78562 749 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 PDAP1Q13442 181 aaKnown RBP11.68□□□□□ -0.54
TRUB1-201ENST00000298746 DLG2Q15700 870 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 SNRNP48Q6IEG0 339 aaKnown RBP11.68□□□□□ -0.54
TRUB1-201ENST00000298746 TTC33Q6PID6 262 aaPredicted RBP11.68□□□□□ -0.54
TRUB1-201ENST00000298746 PID1Q7Z2X4 250 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 LRRC43Q8N309 656 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 FAM149B1Q96BN6 582 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 SIGLEC10Q96LC7 697 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 PNPLA8Q9NP80 782 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 FAM159BA6NKW6 160 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 TTC36A6NLP5 189 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 DENRO43583 198 aaKnown RBP11.68□□□□□ -0.54
TRUB1-201ENST00000298746 PIGNO95427 931 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 MT-CO1P00395 513 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 POLBP06746 335 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 ACAT1P24752 427 aaKnown RBP11.68□□□□□ -0.54
TRUB1-201ENST00000298746 AVPR1AP37288 418 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 AP3M2P53677 418 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 NAGLUP54802 743 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 STILQ15468 1287 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 IL31Q6EBC2 164 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 MAVSQ7Z434 540 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 ANKRD23Q86SG2 305 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 SCUBE3Q8IX30 993 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 NUP93Q8N1F7 819 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 TMEM130Q8N3G9 435 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 DCLK2Q8N568 766 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 NSUN6Q8TEA1 469 aaKnown RBP11.68□□□□□ -0.54
TRUB1-201ENST00000298746 APOL2Q9BQE5 337 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 COQ10BQ9H8M1 238 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 RPF1Q9H9Y2 349 aaKnown RBP11.68□□□□□ -0.54
TRUB1-201ENST00000298746 CDYLQ9Y232 598 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 AP4S1Q9Y587 144 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
TRUB1-201ENST00000298746 HMX2A2RU54 273 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 ITGB3P05106 788 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 PDGFRBP09619 1106 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 CDH2P19022 906 aaPredicted RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 SPRP35270 261 aaPredicted RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 ARL4AP40617 200 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF143P52747 638 aaPredicted RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 NUP107P57740 925 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 CA9Q16790 459 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 FAM47BQ8NA70 645 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 COLGALT1Q8NBJ5 622 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 MAPK15Q8TD08 544 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 TMEM174Q8WUU8 243 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 SNRNP25Q9BV90 132 aaKnown RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 PCDHAC1Q9H158 963 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 SNX15Q9NRS6 342 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 PRKCBP05771 671 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 CCR10P46092 362 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 SLC5A3P53794 718 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 MS4A2Q01362 244 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 PRPSAP1Q14558 356 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 GEN1Q17RS7 908 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 MTX3Q5HYI7 312 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 IL23RQ5VWK5 629 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 PCDH19Q8TAB3 1148 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 FNIP1Q8TF40 1166 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 CYGBQ8WWM9 190 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 ATG4CQ96DT6 458 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 LGMNQ99538 433 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 IL1RL2Q9HB29 575 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 PLGRKTQ9HBL7 147 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 NRBP2Q9NSY0 501 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 KLHL8Q9P2G9 620 aaPredicted RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 HESX1Q9UBX0 185 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 HMGXB4Q9UGU5 601 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 BLOC1S6Q9UL45 172 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 PRPF19Q9UMS4 504 aaKnown RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 OGTO15294 1046 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 PTPN1P18031 435 aaKnown RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 GP5P40197 560 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 RALGDSQ12967 914 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 LSM12Q3MHD2 195 aaKnown RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 SLC9A4Q6AI14 798 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 POTEHQ6S545 545 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 GRIN3AQ8TCU5 1115 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 LRTOMTQ8WZ04 291 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF512Q96ME7 567 aaPredicted RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 UPF3AQ9H1J1 476 aaKnown RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 VPS33BQ9H267 617 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms