RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 C10orf120Q5SQS8 335 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 C16orf46Q6P387 395 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 FAM228AQ86W67 206 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 UTP15Q8TED0 518 aaKnown RBP11.25□□□□□ -0.61
PBRM1-201ENST00000296302 S100ZQ8WXG8 99 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 FBXO28Q9NVF7 368 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 AP4B1Q9Y6B7 739 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 ADGRB2O60241 1585 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 TCF3P15923 654 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 ALOX15P16050 662 aaPredicted RBP11.25□□□□□ -0.61
PBRM1-201ENST00000296302 PSME3P61289 254 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 DDX39BQ13838 428 aaKnown RBP11.25□□□□□ -0.61
PBRM1-201ENST00000296302 POU6F1Q14863 301 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 ZNF554Q86TJ5 538 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 MAP4K3Q8IVH8 894 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 ADHFE1Q8IWW8 467 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 PCDH20Q8N6Y1 951 aaKnown RBP11.25□□□□□ -0.61
PBRM1-201ENST00000296302 FNDC5Q8NAU1 212 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 OR56A4Q8NGH8 313 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 ELOVL6Q9H5J4 265 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 TIMMDC1Q9NPL8 285 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 ITGA11Q9UKX5 1188 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 FAM25AB3EWG3 89 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 FAM25CB3EWG5 89 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 FAM25GB3EWG6 89 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 ALOX15BO15296 676 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 RBL1P28749 1068 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 MAGEA10P43363 369 aaPredicted RBP11.25□□□□□ -0.61
PBRM1-201ENST00000296302 SQLEQ14534 574 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 POLD3Q15054 466 aaPredicted RBP11.25□□□□□ -0.61
PBRM1-201ENST00000296302 ANGPT1Q15389 498 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 KCNT2Q6UVM3 1135 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 NIPA1Q7RTP0 329 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 FAM71AQ8IYT1 594 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 MBOAT7Q96N66 472 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 DGCR6LQ9BY27 220 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 POMKQ9H5K3 350 aa11.25□□□□□ -0.61
PBRM1-201ENST00000296302 PPRC1Q5VV67 1664 aaKnown RBP11.25□□□□□ -0.61
PBRM1-201ENST00000296302 MGAT4DA6NG13 374 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 TMEM191CA6NGB0 347 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 F8VP50 259 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 CPSF4O95639 269 aaKnown RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ITGALP20701 1170 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 CCNG1P51959 295 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 PTAR1Q7Z6K3 402 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 RNFT2Q96EX2 444 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 RERGLQ9H628 205 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 POLR1BQ9H9Y6 1135 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 CLK4Q9HAZ1 481 aaKnown RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SPAG4Q9NPE6 437 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 TSPAN16Q9UKR8 245 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 UMODL1Q5DID0 1318 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 FAM220BPB1ANY3 271 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 GSC2O15499 205 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 MAPK10P53779 464 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 TNK2Q07912 1038 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 TMEM62Q0P6H9 643 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 MAMLD1Q13495 774 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 TSNQ15631 228 aaKnown RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ZNF470Q6ECI4 717 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 IRF2BP2Q7Z5L9 587 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 FGD2Q7Z6J4 655 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SYTL1Q8IYJ3 562 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 AMER2Q8N7J2 671 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ST13P5Q8NFI4 369 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 BORCS5Q969J3 196 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SPRTNQ9H040 489 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 RIBC2Q9H4K1 309 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 TUBA8Q9NY65 449 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 PNMA8BQ9ULN7 279 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ITM2BQ9Y287 266 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 FAM86B1E9PN63 330 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SYNCRIPO60506 623 aaKnown RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 FAM86B2P0C5J1 330 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 FGFR3P22607 806 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 RPL22P35268 128 aaKnown RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SLC11A2P49281 568 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ACVR2BQ13705 512 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 AMHR2Q16671 573 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ADGRF2Q8IZF7 708 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 CYP4Z2PQ8N1L4 340 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ZNF276Q8N554 614 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 TMEM109Q9BVC6 243 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SERHL2Q9H4I8 314 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ACTR8Q9H981 624 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SERHLQ9NQF3 203 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 POLE3Q9NRF9 147 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 RBM22Q9NW64 420 aaKnown RBP eCLIP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 UBP1Q9NZI7 540 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 UBA2Q9UBT2 640 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 KLHL20Q9Y2M5 609 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 NWD1Q149M9 1564 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 DYNC1LI2O43237 492 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 MGRN1O60291 552 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 RECQL5O94762 991 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SNRPB2P08579 225 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms