RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MRPL40Q9NQ50 206 aaKnown RBP13.74□□□□□ -0.21
HPS3-201ENST00000296051 IARS2Q9NSE4 1012 aaKnown RBP13.74□□□□□ -0.21
HPS3-201ENST00000296051 NUDT5Q9UKK9 219 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 RUVBL2Q9Y230 463 aaKnown RBP13.74□□□□□ -0.21
HPS3-201ENST00000296051 USP2O75604 605 aaPredicted RBP13.74□□□□□ -0.21
HPS3-201ENST00000296051 CKBP12277 381 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 TBCCQ15814 346 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 UBAP2Q5T6F2 1119 aaKnown RBP13.74□□□□□ -0.21
HPS3-201ENST00000296051 PLEKHA7Q6IQ23 1121 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 RINLQ6ZS11 566 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 GPR141Q7Z602 305 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 TNS4Q8IZW8 715 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 PIWIL2Q8TC59 973 aaKnown RBP13.74□□□□□ -0.21
HPS3-201ENST00000296051 TAS2R1Q9NYW7 299 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 STXBP5LQ9Y2K9 1186 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 C3P01024 1663 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 NFKBIEO00221 500 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 SUPT7LO94864 414 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 VDRP11473 427 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 AMPD1P23109 780 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 NRLP54845 237 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 NCKAP1LP55160 1127 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 CAPRIN1Q14444 709 aaKnown RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 RBM44Q6ZP01 1051 aaKnown RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 SCUBE3Q8IX30 993 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 OR5B17Q8NGF7 314 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 TFB1MQ8WVM0 346 aaKnown RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 MKL1Q969V6 931 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 CINPQ9BW66 212 aaPredicted RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 CERS4Q9HA82 394 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 IL1RAPL1Q9NZN1 696 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 BTBD7Q9P203 1132 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 CAPN8A6NHC0 703 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 CBX4O00257 560 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 ALOX15BO15296 676 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 PRPF4O43172 522 aaKnown RBP eCLIP13.73□□□□□ -0.21
HPS3-201ENST00000296051 TBX10O75333 385 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 SMIM10L2AP0DMW4 78 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 SMIM10L2BP0DMW5 78 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 ITGB5P18084 799 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 MGAT1P26572 445 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 TKTL1P51854 596 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 PLK1P53350 603 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 MPP2Q14168 576 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 STARD3Q14849 445 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 AGKQ53H12 422 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 PTRHD1Q6GMV3 140 aaKnown RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 TRIM48Q8IWZ4 208 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 VPS50Q96JG6 964 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 ZBTB18Q99592 522 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 PHACTR1Q9C0D0 580 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 ACSS3Q9H6R3 686 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 EBF2Q9HAK2 575 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 CASS4Q9NQ75 786 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 KCNK4Q9NYG8 393 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 STX7O15400 261 aaKnown RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 ACADMP11310 421 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 KDELR1P24390 212 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 PDK1Q15118 436 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 MAPRE2Q15555 327 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 UTS2BQ765I0 119 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.73□□□□□ -0.21
HPS3-201ENST00000296051 KIAA2013Q8IYS2 634 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 ZNF483Q8TF39 744 aaPredicted RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 CGRRF1Q99675 332 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 DCDC2Q9UHG0 476 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 SRP72O76094 671 aaKnown RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 LYNP07948 512 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 ERVK-10P10266 1014 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 BCAT1P54687 386 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 USP4Q13107 963 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 INPP5AQ14642 412 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 SLC5A9Q2M3M2 681 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 CWF19L1Q69YN2 538 aaKnown RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 CNPY3Q9BT09 278 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 TMEM165Q9HC07 324 aa13.73□□□□□ -0.21
HPS3-201ENST00000296051 MRPL17Q9NRX2 175 aaKnown RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 DDX28Q9NUL7 540 aaKnown RBP13.73□□□□□ -0.21
HPS3-201ENST00000296051 TSPAN3O60637 253 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 PEX11AO75192 247 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 NDUFV1P49821 464 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 PTPN11Q06124 597 aaPredicted RBP13.72□□□□□ -0.21
HPS3-201ENST00000296051 ZRANB3Q5FWF4 1079 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 ANO7Q6IWH7 933 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 ARMC6Q6NXE6 501 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 DENND1BQ6P3S1 775 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 FAM192AQ9GZU8 254 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 THG1LQ9NWX6 298 aaKnown RBP13.72□□□□□ -0.21
HPS3-201ENST00000296051 KIAA0100Q14667 2235 aaKnown RBP13.72□□□□□ -0.21
HPS3-201ENST00000296051 M0R2N6 131 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
HPS3-201ENST00000296051 PCDH8O95206 1070 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 SERPINE1P05121 402 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 BMT2Q1RMZ1 405 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 HYIQ5T013 277 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 COLGALT1Q8NBJ5 622 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms