RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 STMN2Q93045 179 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 FAM149B1Q96BN6 582 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 PPP1R14BQ96C90 147 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 BCO2Q9BYV7 579 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 ABCG4Q9H172 646 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 FZD8Q9H461 694 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 PDZD7Q9H5P4 517 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 CAB39LQ9H9S4 337 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 DPP3Q9NY33 737 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 SNTG2Q9NY99 539 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 CNTN3Q9P232 1028 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 PPM1HQ9ULR3 514 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 ZNF638Q14966 1978 aaKnown RBP13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 RGPD3A6NKT7 1758 aaPredicted RBP13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 RGPD4Q7Z3J3 1758 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 PARP14Q460N5 1801 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 B4GALT4O60513 344 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 ATP5HO75947 161 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 DDNO94850 711 aaPredicted RBP13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 DHRS4L1P0CG22 281 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 ICAM3P32942 547 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 TAP1Q03518 808 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 MXD4Q14582 209 aaPredicted RBP13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 LBRQ14739 615 aaKnown RBP13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 C11orf74Q86VG3 221 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 TMEM151BQ8IW70 566 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 LINC00469Q8N7U9 141 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 CCNYQ8ND76 341 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 CEP295NLQ96MC4 621 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 ZNF778Q96MU6 729 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 PANX3Q96QZ0 392 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 CNPY3Q9BT09 278 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 CDHR5Q9HBB8 845 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 UBP1Q9NZI7 540 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 LRRC42Q9Y546 428 aa13.64□□□□□ -0.23
KCNIP3-201ENST00000295225 C19orf81C9J6K1 198 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 I3L4J1 428 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 FZD9O00144 591 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 SNRPAP09012 282 aaKnown RBP13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 PROZP22891 400 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 SDC4P31431 198 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 AP1B1Q10567 949 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 TMEM132DQ14C87 1099 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 CELF3Q5SZQ8 465 aaKnown RBP13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 IL31Q6EBC2 164 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 IRGCQ6NXR0 463 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 LRRC74BQ6ZQY2 392 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 RIPOR1Q6ZS17 1223 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 DNERQ8NFT8 737 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 ZNF333Q96JL9 665 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 LHX5Q9H2C1 402 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 DCLRE1BQ9H816 532 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 ZNF112Q9UJU3 913 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 DNAJC16Q9Y2G8 782 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 CLDN5O00501 218 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 ATP6V1C1P21283 382 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 ACAT1P24752 427 aaKnown RBP13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 MGAT1P26572 445 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 HOXC13P31276 330 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 OAZ1P54368 228 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 TCHHL1Q5QJ38 904 aaPredicted RBP13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 EIF2AQ9BY44 585 aaKnown RBP13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 KRT82Q9NSB4 513 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 AK5Q9Y6K8 562 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 TPP1O14773 563 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 KRT37O76014 449 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 APOEP02649 317 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 RARBP10826 455 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 VAV1P15498 845 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 PTPN7P35236 360 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 HOXD12P35452 270 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 SLC18A2Q05940 514 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 NME3Q13232 169 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 N4BP2L1Q5TBK1 243 aaPredicted RBP13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 C1orf146Q5VVC0 180 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 LPCAT4Q643R3 524 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 CEP128Q6ZU80 1094 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 LZICQ8WZA0 190 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 SLC7A8Q9UHI5 535 aa13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 NOSIPQ9Y314 301 aaKnown RBP13.63□□□□□ -0.23
KCNIP3-201ENST00000295225 GOLGA8QA0A0J9YX86 632 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 GOLGA8OA6NCC3 632 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 GOLGA8NF8WBI6 632 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 SMIM24O75264 130 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 AMHP03971 560 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 NCF2P19878 526 aaPredicted RBP13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 NDUFV1P49821 464 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 TAZQ16635 292 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 FASTKD1Q53R41 847 aaKnown RBP13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 RNF148Q8N7C7 305 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 ACVR1CQ8NER5 493 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 AFG1LQ8WV93 481 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 SIGLEC10Q96LC7 697 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 TSC22D3Q99576 134 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 CORO1CQ9ULV4 474 aaPredicted RBP13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 SSC5DA1L4H1 1573 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 TOMM20Q15388 145 aa13.62□□□□□ -0.23
KCNIP3-201ENST00000295225 C10orf107Q8IVU9 208 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms